| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4569 |
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| Symbol | |
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| ID | 5194967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5111483 |
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| End bp | 5114419 |
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| Gene Length | 2937 bp |
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| Protein Length | 978 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589049 |
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| Product | hypothetical protein |
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| Protein accession | YP_001269873 |
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| Protein GI | 148549771 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.280096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAAAG GATTGACTCG CGCCGCTGGC GCAATCGTGG CCTTGGTAGC CCTGTATAGC
CTGCTCGGCT TTCTCATTCT TCCCGGTGTC GCACTGCGCA TCGCCAACCA GCAGTTGGCC
CAATACGCCA CCGTGCCGGC CCACCTCGAA CGGATCGAAC TCAACCCATT CAGCCTCGAG
CTGACGCTGT GGGGCCTGCA GATCGGCGAG CCGGGCAAGG AGCAGGTCGG TTTCGAGCGT
CTTTACGCTA ACGCCTCGCT CGACAGCCTG TGGACAAAAG CCCTGCATCT GGAAGCGGTG
GAGCTCGACA AACCGCGCAA CGAAGTGCTG TTCGCCAAGG ACGGTACCCT CAACCTGACC
GGGTTGTTCA AACTACCGGC CAGCGAAGCC AAACCCGAAG AGCCGCCCAG CGACCCGTTC
CCGCTGCGTA TTGGCAGCAT CAAGCTCGTC GACGGCTACC TGCACTTCGA GGACCTGCGG
CCCAGCGAGC CGATCGAGTT CCTCTACGAC AACATGAATC TGGAGCTGAA AAACCTCAGC
ACCCTGCCCA ACGACAACGC CGACATGACC TTGGTGGCCA GCGGCCCCAA TGGCGGACGC
ATCGACTGGA AGGGCACGCT GAGCCTGTCG CCGATCGCCT CCGAAGGCAC ACTGAAGGTC
ACTGACGGCA AGATGAAGCT GTTCTGGCCC TACGTGCGCG ATGCCGTGCC ACTGGTGCTG
GAAGACGGCG TGGTAAGCCT CGATACGCAC TACAAGCTCA ACCTCGCCAA ACAGACCGAG
CTGCTGCTGG ATAACGTCTC CGTGCGCATC GCGCCATTCG CGATCAAGGC GCCGGATGGC
CGACCGTTGG CACGCCTGGC CAGCCTGGAG GTTAGCGAAA CCTCCATTGA CCTGGTCAAG
CAGCAGGTCA CGGTGGGCAA GGTTCGCAGC GAAAAGCTCG AAACCTGGGC GGCGCTGGAA
AAAGATGGCC AGCTCGACTG GCAGAAGCTG TTCGCCAGCC AACCCGCCAA GGCCACGCCG
AAGGAAAAGG CCGAGCCGGC GGCCGCAGCA CCTACGCCTG AAGAGAAAGC GGTCAAAGAG
CCAAGCAAAC CCTGGCAAGT GCTGCTCAAG GACGTGCAGT TGCGCAACTA CCTGGTACAC
CTGGAAGATC GCAGCCAAAA GGCACCGGTA GCCTTGGACC TTGGCCCTCT CAATGCCGAC
CTGCAAGGTT TCGACAGCCT CAACCAGTCG CCCTTCACCC TCAAACTCGA TACAGGTGTG
GGTAAGCAAG GCAAGCTGCA GGCTGCAGGC CAGGTCAACC TGGCACCGAT ATGGGCAAAG
CTGGATGTGA GCACCCGCGA CATCGACCTG CGTGTAGCCC AGGCCTACAT CAGCCCGTTC
ATCCTGCTGG AGCTGCGCAG CGGCATGCTC TCGAGCGACC TCAAGGTCGA CCTGAAGAAC
ACCGCGCCGC TGGCCTTCAA TGTGACCGGC AAGGCGCAGG TCAGCCAGTT GCATACCCTC
GACACCATCA AGAGCCGCGA CTTCGTCAAA TGGCAGCAGG TGAACGTCGA CGGCTTGTCC
TACGTGCACG GCGATGCTCT GTCGATCGAC AAGGTGACCC TGCTGCAGCC CTATGCACGC
TTCATCATCA ACGAAGACCG CACTACTAAC GTGAATGATC TGCTGATCCC GCAACCGGCC
GACGCCCCGG CGAGCCGCCA GCCCAAGCCG ACCACGGCCA GCAGCAACAA GCCGCTTGGC
ATCCATATCG GGCAGATCGA CATCAATGAC GGTTCGGCCA ACTTTGCCGA CCTGTCGCTA
ACCCCCAACT TCGCCACAGC CATCCAGCAA CTCAACGGGC AGATCGGCAC CATCGACAAC
CGCAAGCCAC AGCCGGCCAA GGTCGACGTC AAGGGCAAGG TAGACCGCTA CGCACCGGTT
ACCATCAAGG GCGCACTCAA CCCGTTCAAT CCACTGGCCA GCCTGGACAT TGCCACCAGC
TTCAAGCGCG TCGAACTGAC CACGCTGACG CCCTACTCCG GCAAGTTCGC CGGTTTCCGC
ATCCGCAAGG GACGGCTGAA CCTGGACCTG CACTACTTGA TCACCAACGG CCAGCTCAAG
GCCGAGAACA AGGTAGTAGT GGAGCAACTG CAGCTGGGCG AGAAAGTCGA CAGCCCGGAT
GCGGTCGACC TTCCGATCCG CCTGGCGGTG GCATTGCTGA AGGATACCGA GGGCAAGATC
TCGATCGAGC TGCCGGTGTC TGGCGACCTC AACAACCCGC AATTCAGCGT GATGCCGATT
GTTTGGCAAA CCCTGCGCAA CCTGGTGCTG CGCGCGGCGC AGGCGCCATT CAAATTCATT
GGCGGGCTGA TCAGCGGCGG TAGCTCGGAA GACCTTGGCA ACGTGGCCTT CGCCCCCGGC
TCCAGCGAAC TCAGCGGCGA GGCCCAGTCG TCCTTGGACA AGCTGGCATC CGCGCTGAAA
GAGCGCCCGG AACTGCGCCT GGAAATCGAA GGCACCAGCG CCCAGGCCAG TGATGGCCCG
CTCATCGCGC AACAACGCCT GGAGCGTGAG TACCAGGCCA CCTGGTACAA GATCCTGCAG
CGACGGGGTG ACAAGGTGCC GGCCAATGCC TCGATGCTGG TGGTTGACGA CAGTGACAAA
CCGGCGATGC TCGAAGGCAT CTACCGCACC CGCCTGAAGC AGCAGCCGCC TGCCGAATGG
GAGCAGTTGG GCCGTGACGA GCGCGCCGCC AAGCTGCGCG AGGCCGTGAT CAAGTCGTGG
GCCGAGAGTA CCGCCTTGCT GCGTACCTTG GGGCAGGAGC GGGCCAGCAG CATCAAGGAC
TACCTGGTCG ACAAGGGCAA GCTGGAAGAC GACCGGGTGT ACTTCATCGA TACCAGCCTG
GGGCAGCCTC AAAGCGATGG CCGGGTGGTG ACACCGATGC ACCTGGATGC CGAGTAA
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| Protein sequence | MYKGLTRAAG AIVALVALYS LLGFLILPGV ALRIANQQLA QYATVPAHLE RIELNPFSLE
LTLWGLQIGE PGKEQVGFER LYANASLDSL WTKALHLEAV ELDKPRNEVL FAKDGTLNLT
GLFKLPASEA KPEEPPSDPF PLRIGSIKLV DGYLHFEDLR PSEPIEFLYD NMNLELKNLS
TLPNDNADMT LVASGPNGGR IDWKGTLSLS PIASEGTLKV TDGKMKLFWP YVRDAVPLVL
EDGVVSLDTH YKLNLAKQTE LLLDNVSVRI APFAIKAPDG RPLARLASLE VSETSIDLVK
QQVTVGKVRS EKLETWAALE KDGQLDWQKL FASQPAKATP KEKAEPAAAA PTPEEKAVKE
PSKPWQVLLK DVQLRNYLVH LEDRSQKAPV ALDLGPLNAD LQGFDSLNQS PFTLKLDTGV
GKQGKLQAAG QVNLAPIWAK LDVSTRDIDL RVAQAYISPF ILLELRSGML SSDLKVDLKN
TAPLAFNVTG KAQVSQLHTL DTIKSRDFVK WQQVNVDGLS YVHGDALSID KVTLLQPYAR
FIINEDRTTN VNDLLIPQPA DAPASRQPKP TTASSNKPLG IHIGQIDIND GSANFADLSL
TPNFATAIQQ LNGQIGTIDN RKPQPAKVDV KGKVDRYAPV TIKGALNPFN PLASLDIATS
FKRVELTTLT PYSGKFAGFR IRKGRLNLDL HYLITNGQLK AENKVVVEQL QLGEKVDSPD
AVDLPIRLAV ALLKDTEGKI SIELPVSGDL NNPQFSVMPI VWQTLRNLVL RAAQAPFKFI
GGLISGGSSE DLGNVAFAPG SSELSGEAQS SLDKLASALK ERPELRLEIE GTSAQASDGP
LIAQQRLERE YQATWYKILQ RRGDKVPANA SMLVVDDSDK PAMLEGIYRT RLKQQPPAEW
EQLGRDERAA KLREAVIKSW AESTALLRTL GQERASSIKD YLVDKGKLED DRVYFIDTSL
GQPQSDGRVV TPMHLDAE
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