Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4446 |
Symbol | |
ID | 5192518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 4971113 |
End bp | 4972270 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640588921 |
Product | hypothetical protein |
Protein accession | YP_001269750 |
Protein GI | 148549648 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0632572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGGA CATTACGCAT CACCTATTCC CTGTCGTTCC TCGGCCTGCT GGTCGGCATG GGCGCCTGGT CCACCGGTGG CCTGCAGAGT TTCCAGCGCA CCGAGCAGAT GACCCTGCTC AACGGCAAGC TGGCCAAGGC CGCCGAGACC CACTACGACG CCGAGTTCCC GATCAAGCGC CTGGGCACCA ACCTGTGGGC GGCCATGGAC TTCAAGCTGT TCAACGAAGG CCGCCCAGGT GTGGTACTGG GCCGCGACCA GTGGTTGTTC AGCGACGAGG AGTTCAAGCC CACCGCCGGT GCCGAGCAAT TGATGCAGGA AAACCTGGCA TTGATCCGTG GCATACGCGA CACCCTGCAG CAACACGGTA GCCAGCTGGT GCTGGCGATC GTGCCGGCCA AGGCACGGGT CTACGCCGAG TACCTGGGCA AAGAGCGGCC TGCCAGCCTG CATGACGACC TGTACAACCA GTTCCATGCC CAGGCACGCC AGGCCAACGT GTTCGCACCG GACCTGATGG CACCGATGGA GCAGGCCAAG GCCCGCGGCC AGGTATTCCT GCGTACCGAT ACCCACTGGA CGCCTATGGG TGCCGAAGTG GCGGCGCAGG CGCTGGCCGA AGCGGTCAGC CGCCAGAGCC TGCTCAACGG CGACCCACAA GCCTTCATCA CCGAAGCCGG CAACACCGCC CCCTACAAGG GCGACCTGAC CAACTTCCTG CCACTGGACC CCTTGTTCAG CAACCTGCTG CCGGCCCCGG ACAACCTGCA GAAACGCACC ACCCGGCCGG TCGATGCCGA GGGTGACGCC GGCGACGCGT TGTTCGCCGA CAAGCAGATC CCGGTTGCAC TGGTAGGCAC CAGCTACAGC GCCAACCCGC ACTGGAACTT CCTCGGCGCG CTGCAGCAGG CCCTGCGCAG TGACGTCGCC AACTACGCCG AAGACGGCCA TGGCCCGCTG CTGCCGATGC TCAAGTACCT GCAAAGCGAT GCCTTTAAAA ACGCCGCACC ACAAGTGGTG GTGTGGGAAT TCCCCGAACG TTATCTGCCA ATGAAAAACG ACCTCAGCAG CTTCGATCCG CAGTGGATCG CGCAGCTGAA AAACTCCCGT AAATCCGAAG AAAACCTGGC CTTGTCGTCC ACCCGGACAG ACCACTGA
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Protein sequence | MTRTLRITYS LSFLGLLVGM GAWSTGGLQS FQRTEQMTLL NGKLAKAAET HYDAEFPIKR LGTNLWAAMD FKLFNEGRPG VVLGRDQWLF SDEEFKPTAG AEQLMQENLA LIRGIRDTLQ QHGSQLVLAI VPAKARVYAE YLGKERPASL HDDLYNQFHA QARQANVFAP DLMAPMEQAK ARGQVFLRTD THWTPMGAEV AAQALAEAVS RQSLLNGDPQ AFITEAGNTA PYKGDLTNFL PLDPLFSNLL PAPDNLQKRT TRPVDAEGDA GDALFADKQI PVALVGTSYS ANPHWNFLGA LQQALRSDVA NYAEDGHGPL LPMLKYLQSD AFKNAAPQVV VWEFPERYLP MKNDLSSFDP QWIAQLKNSR KSEENLALSS TRTDH
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