| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4226 |
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| Symbol | lysS |
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| ID | 5191293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4727565 |
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| End bp | 4729067 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640588703 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001269534 |
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| Protein GI | 148549432 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.366371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC TGAAGACCGA ATCGCAAGAC CTGCAACAGG AAGAAAACGC CCTGATCGCC
CTGCGCAAGG AAAAACTTGC CGCCGAGCGT GCCAAGGGCA ATGCCTTCCC CAACGACTTC
CGTCGCGACA GCTACTGCAA CGACCTGCAG AAGCAATACG CGGACAAGAC CAAGGAAGAG
CTGGAAGCAG CCGCGATCCC GGTCAAGGTA GCCGGCCGCA TCATGCTCAA CCGTGGCTCG
TTCATGGTTA TCCAGGACAT GACTGGCCGT ATTCAGGTCT ACGTCAACCG CAAGACCCTG
CCGGAAGAAA CCCTGGCCGC GGTCAAGACC TGGGACCTGG GCGACATCAT CAGCGCCGAA
GGCACCCTGG CCCGTTCCGG CAAGGGCGAC CTGTACGTCG AAATGACCAA CGTGCGCCTG
CTGACCAAGT CGCTGCGCCC GCTGCCCGAC AAGCACCACG GCCTGACCGA CACCGAGCAG
CGCTACCGCC AGCGCTACGT CGACCTGATG GTCAACGAAG AAACCCGCCA CACCTTCCGT
GTGCGTTCGC AGGTGATCTC GCACATCCGC AAGTTCCTCA TCGAGCGTGA CTTCCTTGAA
GTCGAAACGC CGATGCTGCA GACCATCCCG GGCGGTGCGG CAGCCAAGCC GTTCGAAACC
CACCACAACG CCCTGGACAT GGCCATGTTC CTGCGTATCG CGCCGGAGCT GTACCTCAAG
CGCCTGGTCG TGGGTGGCTT CGAAAAAGTG TTCGAGATCA ACCGTAACTT CCGCAACGAA
GGCGTTTCGA CTCGTCACAA CCCTGAATTC ACCATGCTCG AGTTCTACCA GGCCTACGCC
GACTACCGCG ACAACATGGA CCTCACCGAG GAACTGTTCC GCGAGCTGGC GCAACTGGTA
CTGGGCTCTA CCGACGTACC GTACGGCGAC AAGGTCTTCC ACTTCGGCGA GCCGTTCGTA
CGCCTGTCGG TGTTCGACTC GATCCTCAAG TACAACCCGG AGCTGACCGC TGCCGACCTG
CAGGACGTCG ACCGCGCCCG TGAGATTGCC AAGAAGGCCG GCGCCAAGGT GCTGGGCCAT
GAAGGCCTGG GCAAGCTGCA GGTGATGATT TTCGAAGAGC TGGTCGAGCA CAAGCTGGAA
CAGCCGCACT TCATTACCGA GTACCCGTTC GAAGTGTCGC CGCTGGCCCG TCGCAACGAC
GACAACCCGG CCGTTACCGA CCGTTTCGAG CTGTTCATCG GTGGCCGCGA GATCGCCAAC
GCCTACTCCG AGCTCAACGA TGCCGAAGAT CAGGCCGAGC GCTTCCTGGC CCAGGTGGCC
GAGAAGGACG CGGGTGACGA TGAAGCCATG CACTATGACG CCGACTTTGT TCGTGCGCTG
GAGTACGGCA TGCCGCCGAC CGCCGGTGAA GGTATCGGCA TCGACCGCCT GGTGATGCTG
CTGACCAACT CGCCGTCGAT CCGCGACGTC ATCCTGTTCC CGCACATGCG TCCGCAGGCC
TGA
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| Protein sequence | MSDLKTESQD LQQEENALIA LRKEKLAAER AKGNAFPNDF RRDSYCNDLQ KQYADKTKEE
LEAAAIPVKV AGRIMLNRGS FMVIQDMTGR IQVYVNRKTL PEETLAAVKT WDLGDIISAE
GTLARSGKGD LYVEMTNVRL LTKSLRPLPD KHHGLTDTEQ RYRQRYVDLM VNEETRHTFR
VRSQVISHIR KFLIERDFLE VETPMLQTIP GGAAAKPFET HHNALDMAMF LRIAPELYLK
RLVVGGFEKV FEINRNFRNE GVSTRHNPEF TMLEFYQAYA DYRDNMDLTE ELFRELAQLV
LGSTDVPYGD KVFHFGEPFV RLSVFDSILK YNPELTAADL QDVDRAREIA KKAGAKVLGH
EGLGKLQVMI FEELVEHKLE QPHFITEYPF EVSPLARRND DNPAVTDRFE LFIGGREIAN
AYSELNDAED QAERFLAQVA EKDAGDDEAM HYDADFVRAL EYGMPPTAGE GIGIDRLVML
LTNSPSIRDV ILFPHMRPQA
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