| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3938 |
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| Symbol | |
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| ID | 5190297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4438328 |
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| End bp | 4439272 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640588411 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001269246 |
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| Protein GI | 148549144 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.2451 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGAGTGT TGGTGACGGG GGCTTCCGGC TTTGTCGGCG GAGCTTTGAT CGAGCAACTT
CGGCTCGATG ATGGTTTACA GCTACGGTTG GCCCAGCGGC GAGCCATCGA AGTGCCGTTC
GCCGAGTGCA TTCAAGTTGG CGATATAAAT GGTGCAACCG ATTGGCAAAC GGTACTGGCG
GGTGTGGATG TAGTTGTGCA TCTGGCTGCT CGTGCGCACA TACTGCATCA CCGCGACGCC
GATCCACTGG CGATGTTCAG GGAGGTCAAC ACCCAAGGCA CATTGAACCT GGCGCGTCAG
GCGGCTTTCG CCGGGGTCAG GCGATTCGTC TTCATCAGCA GTATTGGTGT GAATGGCGCG
CAAACGAAGG GTCAGGCTTT TAACGAGCGA AGTGCGGTAT CGCCTCATTC ACCCTATGCG
CAATCCAAAT ACGAAGCGGA ATGTGGATTG CTCAACATGG CAGAGTCGGG CGTTATGGAG
GTCGTCATCA TCCGGCCGCC GATGATTTTC GCAGCGCACG CGCCGGGTAA TTTTGCACGG
CTACTGAAGC TGACATCCCT TCCTGTGCCT TTGCCGTTCG GCGGGATGGA TAATCTGAGA
AGCCTGGTTT CGCTGCAGAA CCTGATTGGT TTTATCGAAC TTTGTGTCAA AAGTCCGCAC
GCGGCGAACG AGGTCTTCCT GATTTGTGAC GGTGATGATG TTTCGACGGA GGAAATGGTT
CGCCGGCTGG CTAAGGGTAT GGGTTGTCGC CGTTGGTTGC TGCCATTTCC CAAAACCATC
CTTCACTGGA TGGCAATATT GACCGGCAGG GAAAGCATGT ATATCCAGCT TTTTGGCTCG
CTTCAAATTG ATGCAGGCAA AGCGCGTGAA TTATTGCAAT GGGAACCGCG CGTGAGCACG
CATCAGGGGC TCGAGGAGGC AGGTAGAAGG TACAAGGCTG GATGA
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| Protein sequence | MRVLVTGASG FVGGALIEQL RLDDGLQLRL AQRRAIEVPF AECIQVGDIN GATDWQTVLA
GVDVVVHLAA RAHILHHRDA DPLAMFREVN TQGTLNLARQ AAFAGVRRFV FISSIGVNGA
QTKGQAFNER SAVSPHSPYA QSKYEAECGL LNMAESGVME VVIIRPPMIF AAHAPGNFAR
LLKLTSLPVP LPFGGMDNLR SLVSLQNLIG FIELCVKSPH AANEVFLICD GDDVSTEEMV
RRLAKGMGCR RWLLPFPKTI LHWMAILTGR ESMYIQLFGS LQIDAGKARE LLQWEPRVST
HQGLEEAGRR YKAG
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