| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3924 |
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| Symbol | |
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| ID | 5195357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4418453 |
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| End bp | 4419280 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640588397 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001269232 |
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| Protein GI | 148549130 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.415851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATGCTC ACCTGCGTCA TACTGCCGGC CCCGCCAGCC TGACGATCAG CCTCTGGAAA
AACCGGTCGC TGATCTCGCA GATGACCAAG CGCGAGGTCA TCGGCCGATA TCGAGGATCG
GTAATGGGCT TGGCCTGGTC GTTTTTCAAC CCGATCCTGA TGCTGGCCGT TTACACATTC
GTGTTTTCGG AGATCTTCAA GACGCGCTGG GTCGGAGTAG ACACTGGCAA AGGTGGATTC
GCGATACTGC TTTTCGTCGG AATGATCATT CACGGGCTGT TTGCGGAATG CGCCAACCGT
GCCCCGTCCC TCATCATGAA CAACAGTAAC TACGTGAAAA AAGTGGTATT CCCACTGGAG
ATTCTGCCGG TCATTACCTT GGGATCGGCC CTCTTTCATA GCTGCATCAG CTTGCTGGTG
CTACTGATCG CCCAGTTCCT GATCGTCGGC ACGCTCTACT GGAGCGCCTT GCTGTTTCCG
CTGATCCTCG TTCCCTTGAT TCTCGCGACC CTGGGCATCA GTTGGCTATT GGCCTCACTG
GGCGTTTACC TGCGAGACGT GGGGCATGTC ATCACCGTAC TGACAACGGT CCTGCTGTTC
CTCTCTCCGG TGCTCTATCC AGTGGCTGCA CTGCCCGAAG CCTACCAGCC CTGGCTAAAG
CTCAACCCTT TGACCTACAT CATCGAGGAA AGCCGTAGCG TCCTACTCTT CGGCAACCTG
CCAGACTGGG TCAACCTGGC AACTGCCCTC GCGGTGGGTG CAATTATCGC TGCCGCCGGA
TTCTGGTTCT TCCAAAAGAC GCGCAAAGGA TTCGCCGATG TCATCTGA
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| Protein sequence | MNAHLRHTAG PASLTISLWK NRSLISQMTK REVIGRYRGS VMGLAWSFFN PILMLAVYTF
VFSEIFKTRW VGVDTGKGGF AILLFVGMII HGLFAECANR APSLIMNNSN YVKKVVFPLE
ILPVITLGSA LFHSCISLLV LLIAQFLIVG TLYWSALLFP LILVPLILAT LGISWLLASL
GVYLRDVGHV ITVLTTVLLF LSPVLYPVAA LPEAYQPWLK LNPLTYIIEE SRSVLLFGNL
PDWVNLATAL AVGAIIAAAG FWFFQKTRKG FADVI
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