Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3890 |
Symbol | |
ID | 5192896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4370185 |
End bp | 4370787 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640588363 |
Product | glutathione S-transferase domain-containing protein |
Protein accession | YP_001269198 |
Protein GI | 148549096 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.19285 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACAAGG TCTATGGCGA CTACCAGTCG GGTAACTGTT ACAAGGTCAA GCTCATGTTG AGCCTGCTGG GCCGGCCCTA TGAATGGCAC CCGGTGGACA TCCTCAAGGG CGAGACCGAA ACGCCCGAGT TTCTGGCGAT GAACCCTAAC GGCAAGGTAC CGGTGCTGGA ACTGGAAGAC GGTAGCTACC TGTGGGAGTC CAACGCCATT CTCAACTTCC TGGCCGATGG CAGCGAGTTC CTGCCCAGCG AGCCGCGCCT GCGTACCCAG GTGCTGCAGT GGCAGTTTTT CGAGCAGTAC AGCCATGAGC CGTACATTGC CGTGGCGCGG TTCATCCAGT TCTACCTGGG GTTACCGGAC GAGCGCCTGG ACGAGTACCG CAAATTGCAC AAGGGCGGCT ACAAGGCGCT GAAGGTGATG GAGCGACAGT TGCAGATGAC GCCTTACCTG GTGGGTGAGC ACTACTCGAT TGCCGATGTG GCGTTGTATG CCTACACCCA TGTGGCGCAG CAGGGCGGCT TCGACCTGGC GGAGTACCCG GCGGTAAGGG CCTGGCTGGA GCGGGTCAGC AGCCACCCGC GGCATGTGCC GATGGTGGGT TGA
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Protein sequence | MYKVYGDYQS GNCYKVKLML SLLGRPYEWH PVDILKGETE TPEFLAMNPN GKVPVLELED GSYLWESNAI LNFLADGSEF LPSEPRLRTQ VLQWQFFEQY SHEPYIAVAR FIQFYLGLPD ERLDEYRKLH KGGYKALKVM ERQLQMTPYL VGEHYSIADV ALYAYTHVAQ QGGFDLAEYP AVRAWLERVS SHPRHVPMVG
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