| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3561 |
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| Symbol | |
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| ID | 5192247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3979430 |
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| End bp | 3980323 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640588017 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001268870 |
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| Protein GI | 148548768 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.313807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAACG GTTTCCCTGA TTTGCCCTCA CTCAATGCGC TACGTGTGTT CGAAGTGGTT
GCCCGCCACC TGAACTTTCG CCTGGCCGCC GACGAGCTGG GGGTGACCCA GGCGGCAGTG
GCACAACAGA TACGCGGGCT GGAAGCGAGC CTGAACCTTC GTTTGTTCGA GCGCCTGCCC
CGGGGCCTGG CACTGACCGA TGCGGGGCTG GGCTACAGCG GCAGCATTCG CAACGCCTTG
GCGATGATCG ATGAGGCAAC CCGCCTGCTG CGGCCACAAG CGTCTCATCT GACGGTCAGC
GTGACACCGA CCTTTGCCTC CAAATGGCTC ATTCCCCGGC TGGGCCGCTT TGCGCACAGC
CATCCGGACA TCGATTTACG TGTACTGGCC ACAGATCGGC TGTCCCACTT CAATACCGAC
GGCGTGGATC TCGCAGTCCG CTATGGCAAG CCCGACATCG GCGCGGGTTT GAACAGCGAA
CTGTTGATGG AACAGCATAT CGTCGCCGTG GCCAGCCCAA GGTTGTTCGA AGCCAGCAAA
GTCCCCACCA GCTTCGAGCA GCTTCAAGCG TTCACCCTGC TTCACGATGC CCATGATTTC
TGGCCTCGGT TCCTTGCACA ACTGTTCCCG CAACACGGGC AAGCGACTGC CAAAAACCTG
CGGTTCAACC AGACTTCATT GGCCATCGAT GCGGCCATCA GTGGTCAGGG TATTGCGTTG
GCAAGCCTGG CGTTCGTCAG TGATGACCTC GTCGCGGGCA GGCTGACCCA GGTCTTCGCT
CAGCAACTCA GGCTCGATAA GTCGTTCTAT CTGGTATGGC CACGAAAGTT GCAGCAGCCG
GAGTCGCTAG GCATTGTCCA GCGCTGGCTC AAGCAACAAG CAGGCAATAG TTAA
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| Protein sequence | MPNGFPDLPS LNALRVFEVV ARHLNFRLAA DELGVTQAAV AQQIRGLEAS LNLRLFERLP
RGLALTDAGL GYSGSIRNAL AMIDEATRLL RPQASHLTVS VTPTFASKWL IPRLGRFAHS
HPDIDLRVLA TDRLSHFNTD GVDLAVRYGK PDIGAGLNSE LLMEQHIVAV ASPRLFEASK
VPTSFEQLQA FTLLHDAHDF WPRFLAQLFP QHGQATAKNL RFNQTSLAID AAISGQGIAL
ASLAFVSDDL VAGRLTQVFA QQLRLDKSFY LVWPRKLQQP ESLGIVQRWL KQQAGNS
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