| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3549 |
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| Symbol | |
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| ID | 5191744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3966368 |
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| End bp | 3966985 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640588005 |
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| Product | tRNA--hydroxylase |
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| Protein accession | YP_001268858 |
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| Protein GI | 148548756 |
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| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4445] Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTGA TCCCCGAAAT CGACGCCTTT CTTGGCTGCC CGACGCCAGA CGCCTGGATC
GAAGCGGCGC TCGCCGACCA GGAAACCCTG CTGATCGACC ACAAGAACTG CGAGTTCAAG
GCCGCCAGCA CGGCCTTGAG CCTGATCGCC AAGTACAACA CTCACCTTGA TCTGATCAAC
ATGATGTCGC GCCTGGCCCG CGAGGAGCTG GTGCATCACG AACAGGTGTT ACGCCTCATG
AAGCGTCGCG GGGTGCCGTT GCGCCCGGTA TCGGCGGGGC GTTACGCGTC GGGGTTGCGC
CGGCTGGTGC GCGCCCACGA ACCGGTCAAG CTGGTGGATA CGCTGGTGGT GGGGGCGTTC
ATCGAGGCGC GCAGTTGCGA ACGTTTTGCC GCGCTGGTGC CGCATCTGGA TGAAGAGCTG
GGCCGCTTCT ACCACGGGCT GCTGAAAAGC GAAGCGCGCC ACTACCAGGG CTACCTGAAA
CTGGCGCACA ACTACGGTGA TGAAGCGGAC ATCGCCCGCC GTGTCGAGCT GGTACGCGCT
GCGGAAATGG AGCTGATCCA GTCGCCAGAC CAGGAACTGC GCTTCCACAG CGGCATCCCG
CAGGCTTTGG CCGCCTGA
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| Protein sequence | MSLIPEIDAF LGCPTPDAWI EAALADQETL LIDHKNCEFK AASTALSLIA KYNTHLDLIN
MMSRLAREEL VHHEQVLRLM KRRGVPLRPV SAGRYASGLR RLVRAHEPVK LVDTLVVGAF
IEARSCERFA ALVPHLDEEL GRFYHGLLKS EARHYQGYLK LAHNYGDEAD IARRVELVRA
AEMELIQSPD QELRFHSGIP QALAA
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