| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3520 |
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| Symbol | |
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| ID | 5192608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3933134 |
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| End bp | 3934312 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640587977 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_001268830 |
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| Protein GI | 148548728 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.674245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0855075 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTGGC GAGAGCTGAA ACCTATGGAC CTGAAAATGC TTTTCATCGC GGATTACCTG
CAAGGGCCGC CCAGCTTCAG CGCCCTGTGC CAGGCCTATG AGATCAGCCG TAAGACCGGC
TACAAATGGG TCGAGCGATA TGAGAAAGAG GGGCCTTCGG GGCTGGAAGA ACGCAGCCGC
CGCCGGTTGA CGCAGAACTG GGTCGTCCCC GCTGCAGTTC GCGAAGCCAT CATCGAACTG
CGCAGTCGAG GCGAAACGGA ACCTGGTCCG AAAAAGATCC AGGCTGCGCT GCAGGAGCGC
TTCCCTGATC AGGCGCCGCC TTCTAAGACA GCGATTTACA ACATCCTCAA GAAGGCCGAG
TTGGTCAACC CACGCCGTTT ACGTCAGCGT GTAGCGGTCT ACCCCAAGCC ACTGGAGAAG
GCAGAGTCGC CTAACCAGCT GTTCAGTGCT GACTACAAGG GCCAATTTCT GACAGGCGCA
GGCGTCTGGT GCTATCCACT AACGATCATG GATCACGCCA GCCGCTTCCT GCTCGCCTGC
CACAGCATGC CTAATACCAA CCTTCTGGAA ACGCAGGCCG TTTTCACCCA GGTGTTTCGG
GAAAATGGCC TGCCTGAGCG TATTCGTACC GATAACGGTG TGCCGTTTGC CAGTAAAGGA
CGTGCAGGAC TTTCTCAGCT GTCCATCTGG TGGCTGCGTC TAGGCATCAT TCCTGAGCGC
ATTGCACCTG GAAGGCCTGA GCAAAATGGC CGCCACGAAC GCATGCATCG GACACTCAAA
AGCACGCTGC CATCACCGCC GGCAGTGGCC TGGGAAGCTC AACAGCGGCA TTTTGATCGC
TTTCGACAAC ACTACAATTA CGAGCGCTTG CATGAAGCAC TGAAACAGAA AACACCGGCG
TCTTGCTACC AGCCCTCACC ACGCCCATTC CCTGAAAAAC TTCCTGAGAT GACCTACCCC
AGCCATGTCG AGAGTTTACC GGCGGATAGC TGCGGCATCA TTAACCGCCG TGGCCTGAGG
ATCTACGTAG GTTACGTGCT CAAGCACCAG ACCATTGGGC TGGAGCAAGT CGGAGATGGC
ATTTGGGATG TTATTTTCGG TCCCATCATC CTTGGTAGAG TCGATGTGCG GGATGCCACT
GATGGTTATG TAACACTCAA GGTGTTGTCA CCTATGTGA
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| Protein sequence | MPWRELKPMD LKMLFIADYL QGPPSFSALC QAYEISRKTG YKWVERYEKE GPSGLEERSR
RRLTQNWVVP AAVREAIIEL RSRGETEPGP KKIQAALQER FPDQAPPSKT AIYNILKKAE
LVNPRRLRQR VAVYPKPLEK AESPNQLFSA DYKGQFLTGA GVWCYPLTIM DHASRFLLAC
HSMPNTNLLE TQAVFTQVFR ENGLPERIRT DNGVPFASKG RAGLSQLSIW WLRLGIIPER
IAPGRPEQNG RHERMHRTLK STLPSPPAVA WEAQQRHFDR FRQHYNYERL HEALKQKTPA
SCYQPSPRPF PEKLPEMTYP SHVESLPADS CGIINRRGLR IYVGYVLKHQ TIGLEQVGDG
IWDVIFGPII LGRVDVRDAT DGYVTLKVLS PM
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