Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3502 |
Symbol | |
ID | 5195470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3916653 |
End bp | 3918461 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640587959 |
Product | peptidase M24 |
Protein accession | YP_001268812 |
Protein GI | 148548710 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0006] Xaa-Pro aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0384792 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.580745 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTCC AGACCACCCT TGAGCAAAGC GTGCCGCAGC GACTGGTGCA CGTGCGCCAA GCCATGGCGG CAGCGGGCAT CGATGCCTTG CTGGTCCCCT CGGCCGACCC CCATCTTTCC GAATACCTGC CCGGTTACTG GCAGGGGCGC CAGTGGCTTT CGGGGTTCCA GGGCTCGGTC GGCACGCTGG TGGTGACGCC TGGGTTTGCC GGGCTGTGGG TCGATAGCCG CTACTGGGAG CAGGCAGCTC AGGAGCTGGA GGGCAGCGGC ATCGAACTGA TGAAACTGTT GCCGGGTAAA CCCGGAGCGT TGGAATGGTT GGCCGAAAAC GTCGAGCCCA ACGGTCGCGT GGCAGTGGAT GGTGCGGTCA TGGCCCTGGC TTCGGCGCGC CAGCTGGCCG AGCGGCTGAA GGCGCGTGGA GCGCAGTTGG TGACTGACAT GGACCTGCTG GGTCAGGTCT GGGACGGGCG CCCGGCGCTG CCAGGTAACC CGGTGTACCA GCACCTGCCG CCACACGCCA CGGTGAGCCG GGCGGATAAG CTCGCGCAAT TGCGCCAGGG CATCCTGGCC AAGGGGGCCG ACTGGCACTT CATCGCTACC CTGGATGACA TTGCCTGGCT ATTCAACCTG CGCGGCAGCG ATGTCTCTTA CAATCCGGTT TTCCTGGCCT TTGCCCTGAT CAATCAGCAG CAGGCCATCC TGTTCGTGGG CCAGGACAAG GTGGGCGCGC ACCTGCGTCA TGTGCTGGAG GTCGACGGCA TCGAGGTGCG CGACTACAGC GAAGCAGGCA AGGCGCTTGG CACCGTTCCT GCGGGGGCGC GGCTGCTGGT GGACCCGGCC CGGGTCACCT GCGGCCTGCT GGACAACCTG GCGGCAGAGG TGGTGGTTGT CGAGGGGCTC AACCCCACCA CGCTGAGCAA GTCCTGTAAA AGTGACGACG ACCTGGTGCA TATTCGCCAG GTCATGGAGC AGGACGGCGC AGCCTTGTGC GAGTTTTTCG CCTGGTTCGA GGCGAACCTC GGCCGGGAGG CCATTACGGA GCTGACGGTT GACGAGCAAT TGAGTGCCGC GCGTGCTCGA CGCCCTGATT TCGTGTCGCT GAGCTTTTCT ACCATTGCCG CCTTCAATGG CAATGGCGCG ATGCCACACT ACCGTGCCAC CGAGCAGTCG CATGCGCTCA TCGAGGGTAA TGGCTTGCTA CTGATCGACT CGGGCGGTCA ATACCTGGGC GGCACTACCG ACATCACCCG CATGGTGCCG GTCGGTAACC CCAGTCTGGC ACAGAAGCAG GACTGCACCC GTGTACTCAA GGGCATGATT GCCCTGTCCC GTGCCACGTT CCCGCGAGGG GTACTGTCGC CGTTGCTCGA CGCCATTGCC CGGGCGCCGA TCTGGGCTGA CCAGGTCGAC TACGGCCATG GTACCGGCCA CGGGGTGGGC TACTTCATGA ACGTGCACGA GGGGCCTCAA GTGATCGCCT ACCAGGCGGC ACCCGCACCG CAGACGGCCA TGCAAGCGGG CATGATCAGC TCGATCGAGC CGGGTACGTA CCGCCCGGGG CAGTGGGGCG TTCGCATCGA GAACCTGGTG GTCAACCGCG AAGCGGGGAG GAGTGCCTTT GGTGACTTCC TGCAATTCGA GACCTTGACG CTGTGCCCTA TCGACACCCG CTGTCTGTTG CCCGAGTTGC TGACCAAGGA AGAGGTGGAG TGGCTGAACG GCTATCACGC CCGCGTACGT GAGCGCCTGG CGCCCTTGCT CAAAGGGGAT GCGCGAGCCT GGTTGGAGGT GCGTACTGCA CCGCTGTAA
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Protein sequence | MNVQTTLEQS VPQRLVHVRQ AMAAAGIDAL LVPSADPHLS EYLPGYWQGR QWLSGFQGSV GTLVVTPGFA GLWVDSRYWE QAAQELEGSG IELMKLLPGK PGALEWLAEN VEPNGRVAVD GAVMALASAR QLAERLKARG AQLVTDMDLL GQVWDGRPAL PGNPVYQHLP PHATVSRADK LAQLRQGILA KGADWHFIAT LDDIAWLFNL RGSDVSYNPV FLAFALINQQ QAILFVGQDK VGAHLRHVLE VDGIEVRDYS EAGKALGTVP AGARLLVDPA RVTCGLLDNL AAEVVVVEGL NPTTLSKSCK SDDDLVHIRQ VMEQDGAALC EFFAWFEANL GREAITELTV DEQLSAARAR RPDFVSLSFS TIAAFNGNGA MPHYRATEQS HALIEGNGLL LIDSGGQYLG GTTDITRMVP VGNPSLAQKQ DCTRVLKGMI ALSRATFPRG VLSPLLDAIA RAPIWADQVD YGHGTGHGVG YFMNVHEGPQ VIAYQAAPAP QTAMQAGMIS SIEPGTYRPG QWGVRIENLV VNREAGRSAF GDFLQFETLT LCPIDTRCLL PELLTKEEVE WLNGYHARVR ERLAPLLKGD ARAWLEVRTA PL
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