| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3478 |
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| Symbol | |
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| ID | 5194589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3883750 |
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| End bp | 3884844 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640587930 |
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| Product | ABC transporter related |
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| Protein accession | YP_001268788 |
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| Protein GI | 148548686 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.665617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0613026 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTGG TGCTGGAGCA GGTCAGCCGT AGCGTCGACA ACCAGCCGTG GATCGTCGAG
GCGTCACTGC GTTTCGAGCC CGGTTCGTTC AATGTGCTGC TGGGTCGCAC CCTGGCCGGC
AAGACCAGCC TGATGCGCCT GATGGCCGGG CTGGACCGTC CGGACCGGGG GCGGGTGCTG
ATGGATGGCC AGGACGTCAC CGGTGTGCCG GTGCGTCAGC GCAATGTGTC GATGGTGTAT
CAGCAATTCA TCAATTACCC GACCTTGAGC GTGTACGAAA ACATCGCCTC GCCGCTGCGC
CAGGCGCGCA TGGCCGAGGA CCAGATCCGA CGGCGGGTGC AGGAAACTGC CGAGATGCTG
CGCATCGAAA CCTACCTGCA ACGCCTGCCA CTGGAGCTCT CCGGTGGCCA GCAGCAACGC
ACGGCGATGG CCAGGGCACT GGTCAAGGAT GCCTCGTTGA TCCTCTTCGA CGAGCCATTG
GTCAACCTCG ACTACAAGTT GCGCGAAGGC CTGCGCCAGG AGCTGCGCGA GCTGTTCGCG
GCGCGCCATT GCATTGCGGT GTACGCCACC ACCGAGCCCA ACGAGGCGCT GGCACTGGGC
GGCACCACCA CGCTTGTGCA CGAAGGCCGT ATCGTGCAGA GCGGGCCCAC CGCCGAGGTC
TATCAGCACC CTAGCAGCGT GCTGGCTGCT GAGCTGTTTT CCGAGCCACC GATCAACCTG
GTGTCTGGCC GTATCACGGG TAACGAGGTG AGCCTGGCCC AGACCGTGCA CTTTGCCCGC
AATGCCGACC TGGAGCCGCT GGCCGAGGGT GACTACCGCT TCGGCGTGCG CCCCAGCCAT
ATCGCGCTGG TGCCGGCCCA TGACGATGAC CTGGAGCTGG CGGTGCTGGT GGAGTTGGCC
GAGATCAGTG GGTCAGAAAC ATTTCTGCAT GTGCGCAACG AATACTGGCG CATGGTGCTG
CACCTTCCCG GGGTGCACGA ATACCAGGTG GACACGCCGA TACGCGTGTT CATCCCCACG
CACAAGCTGT TCGTTTTCGA CAGCGCCGGG GTGTTGGTGC AGGCCCCGGG GCTGCGCCAG
GCGAGGAGAG GGTGA
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| Protein sequence | MSLVLEQVSR SVDNQPWIVE ASLRFEPGSF NVLLGRTLAG KTSLMRLMAG LDRPDRGRVL
MDGQDVTGVP VRQRNVSMVY QQFINYPTLS VYENIASPLR QARMAEDQIR RRVQETAEML
RIETYLQRLP LELSGGQQQR TAMARALVKD ASLILFDEPL VNLDYKLREG LRQELRELFA
ARHCIAVYAT TEPNEALALG GTTTLVHEGR IVQSGPTAEV YQHPSSVLAA ELFSEPPINL
VSGRITGNEV SLAQTVHFAR NADLEPLAEG DYRFGVRPSH IALVPAHDDD LELAVLVELA
EISGSETFLH VRNEYWRMVL HLPGVHEYQV DTPIRVFIPT HKLFVFDSAG VLVQAPGLRQ
ARRG
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