Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3270 |
Symbol | |
ID | 5191684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3678282 |
End bp | 3679187 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640587717 |
Product | AraC-like transcriptional regulator |
Protein accession | YP_001268580 |
Protein GI | 148548478 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTGA CCCGTCACGT CGATGCCAAT GCGCCGCTTT GCGCACTGAT CCGCAGCCTC GCCACGCGCC CAGGCTTTGT GCCCACGCAC CTGCCCCAGG TACAGGTGCT GAGCTGGGAC CACTATGTGG CCAGCAGCCC GCAGATCTAC GAACCAAGCC TGATGATCCT GGCCCAAGGC AGCAAGCTGG CGCGCCTGGG GCCGCGCACC CTGGAGTACG GCGCCGGGCA TTACCTGGTG CAGGCGTTGT CGGTGCCGTT CATGTGCGAA ACCTTCGCCA CCCCTGACGC GCCATTGCTG GGCGTGGCGG TGGGCATCGA CCGTGGCGTG CTGGGCGAGT TGGTGCAGAG CATGGGCTTG GCACCGGACG CTGAAGTGCA GGCGCAAACA CCGCAATCGA TGACGTCGGC GGCACTGGAT GCGCCCATGC GCGAAAGCGT GGAGCGGCTG CTGCGCTGCC TGCACGACCC GCTGGACGCC AAGGTGCTGG GCCCGGCGCG TGTGCGCGAA GTGCTGTACA CCGCCCTGCG TGGCCCGCAG GCCGGTGTGC TGCGGGCACT GGTGGAGCAA CAGGGGCACT TCGCCCGCAT CGGCGCCGCC CTCGCCCACC TGCGCGAGCA CTACAGCGAG CCGCTGAGCG TGGAGGCACT GGCTGCGCGC GCCAACATGA GCGTTTCAAC CTTCCACGAA CATTTCAAGC GCTGCACCGA CATGGCGCCG ATGCAGTACC TCAAGCGCTT GCGGCTACTC AAGGCGCAGC AGATGCTGAT TGGCGAAGGC CTGGGCGTGG CACAGGCTGC GCACAGGGTG GGCTATCAGA GCACCTCGCA GTTCAGCCGC GAATACAAGC GCCAGTTCGA ACGCAGCCCA GGGGATGAAT TGCCTTACCA AAGCATGCCG GTGTAA
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Protein sequence | MQLTRHVDAN APLCALIRSL ATRPGFVPTH LPQVQVLSWD HYVASSPQIY EPSLMILAQG SKLARLGPRT LEYGAGHYLV QALSVPFMCE TFATPDAPLL GVAVGIDRGV LGELVQSMGL APDAEVQAQT PQSMTSAALD APMRESVERL LRCLHDPLDA KVLGPARVRE VLYTALRGPQ AGVLRALVEQ QGHFARIGAA LAHLREHYSE PLSVEALAAR ANMSVSTFHE HFKRCTDMAP MQYLKRLRLL KAQQMLIGEG LGVAQAAHRV GYQSTSQFSR EYKRQFERSP GDELPYQSMP V
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