| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3177 |
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| Symbol | |
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| ID | 5191958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3592330 |
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| End bp | 3593106 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640587621 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001268487 |
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| Protein GI | 148548385 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.567568 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTAG GCATCACCGG CCGCTGGGCC ATCGTCTGCG CGGCCAGCCA AGGCCTTGGC
AAAGGCTGCG CCGAAGCGCT GGGCAAAGAA GGCGTCAACC TGGTCATCAA TGCCCGTACC
CAGGCCACCC TGGAGCAGAC CGCCAGCGAG TTGCGCAGGG CCTGCCCGGG CATCGAGGTC
CATACCGTGG CAGGTGATGT GGCCGATCCC AAGGTGCGCC TGGCGCTGTT GGCGGCCTGC
CCGCAGGTCG ACATTCTGGT CAACAACGCC GGTGGCCCGC CACCGGGGGA CTTCCGTGAT
TGGGAGCGTG ATGACTGGCT GAAGGCGCTG GACGCCAACA TGCTCACGCC CATCGAGCTG
ATCAAGGCGG TGGTAGATGG CATGGCCGAA CGTGGTTTTG GCCGGGTGGT GAACATCACC
TCCGGCGCGG TGAAGGCACC GATCGACATG CTGGGTTTAT CCAACGGTGC CCGCAGTGGC
CTGACCGGAT TCATTGCCGG CCTGGCCCGG CAGCAGCGCC TGGCGGGCCG CAATGTGACA
CTCAACAACC TGTTGCCTGG GGCGTTCGAC ACGGCGCGCC TGCAAAAGAC CTTGAAGGCT
GCGGGTGGTG ATGTGGAAGT CACTGCCCAG GCGCGGCGCA AGGCCATTCC GGCGTCGCGT
TTTGGCGAAG CCGCGGAGTT TGGCGCGTAT TGCGCATTTC TGTGCAGTGC GCATGCCGGG
TACATCACCG GGCAGAACCT GCTGATCGAT GGCGGGGCGT ATCCAGGAAC CTACTGA
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| Protein sequence | MDLGITGRWA IVCAASQGLG KGCAEALGKE GVNLVINART QATLEQTASE LRRACPGIEV
HTVAGDVADP KVRLALLAAC PQVDILVNNA GGPPPGDFRD WERDDWLKAL DANMLTPIEL
IKAVVDGMAE RGFGRVVNIT SGAVKAPIDM LGLSNGARSG LTGFIAGLAR QQRLAGRNVT
LNNLLPGAFD TARLQKTLKA AGGDVEVTAQ ARRKAIPASR FGEAAEFGAY CAFLCSAHAG
YITGQNLLID GGAYPGTY
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