| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3049 |
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| Symbol | |
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| ID | 5194878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3431465 |
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| End bp | 3432766 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640587495 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001268361 |
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| Protein GI | 148548259 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.310931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGAC CGCTACCCAC ATCGCCGAGC CTGCAAACAG GTGCGCATTC AGCCGCGCAG
GTATCGTCCT CCCGTAAAAC CTTGGTCGCC TGCTCGTTGG GCAATGCGCT GGAAATGTAC
GACTTCACGA TCTACAGCTT CTTCGCTGTA CTGATCGGCA AGCACTTCTT CCCCTCCGAC
TCGGCCATGG CGTCGTTGTT GATGTCGCTG GCCACCTTTG GCGTCGGTTT CCTGATGCGC
CCGGTCGGGG CGATGGTCAT CGGCCACTAT GCTGACCGGC ATGGACGCAA GGCCGCTTTG
AGCCTGACCA TCGGGCTGAT GACCCTGGGC ACCGCAATGA TTGCCTTTGC GCCCACGTAT
TCACAGATCG GGATTTTCGC CACCTTGCTG CTGGTGACCG GCCGGCTCAT CCAGGGCATG
TCGGCAGGCG GGGAGATCGG TACCGCGTCG GTGTTCCTGA TGGAATCCAG TGCAGTCGGC
AATCGCTGCC AGAGCGTCAG CTGGCAGGCC GCCAGCCAAG GCTATGCCGC CTTGGTGGGG
GCCGGCTTTG GCCTGGCCCT CAGCCAGTTG CTCGACCCTT CCGCGCTGGA AAGCTGGGGA
TGGCGCATAC CGTTCATTTT TGGCCTGCTG ATCGGGCCGG TCGGTTGGTA CATACGCACG
CGGTTGCCGG AGACCCATGA GGCCGCACCG GCGCAGAAGG CAGAGCAGGG GCTGGATGCC
GAACTGCTCA AACGCATCGC CCAAGGCATC GGCCTGATGG CCAGCTCGAC CATTGGCATG
TACCTGTTCG TGTTCTACAT GCCGACCTAC CTGACCACCG CCTTGCATTA TCCACCCGGC
AGCGCGATGG CGATTGCCTG CATCAGTAGC GGTTGCATGG CTGTCATCTG CCCGTTGGCC
GGCAAATTCG CCGACAAGTA TCAGCTCAGA AAACGCCTGC TGGTGTGGAC GGTCGCCGCG
CCGGTGGTGT TGACCCTGCC CGTGTTCTAT CTGCTTGGGC ACGTGCAGCA CATGGGCCTG
GCCATGATGG GCGTGGCGAT CCTGATCTTG CCGACCTGTA TCGGTGCCGG TGCGTTCTTC
GCGCTGATCA TGGAGGGCTT CCCGAAGGCC AGGCGCTCGT TCGGCACCTC GGTCAGCTAC
AGCCTGGGGG TGACCCTGTT CGGTGGTTTT TCGCCGTTGG TGGCCACTTG GCTGATTGCA
GCGCTGGGCA CGCCGTTGGC GCCAGCTTAC TTCTTGCTGG CCGGCGGCAT CGTCAGCCTG
GCCTGCCTCA GGTACTTCCC CGAAAACAAA GGATGCGAGT GA
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| Protein sequence | MIRPLPTSPS LQTGAHSAAQ VSSSRKTLVA CSLGNALEMY DFTIYSFFAV LIGKHFFPSD
SAMASLLMSL ATFGVGFLMR PVGAMVIGHY ADRHGRKAAL SLTIGLMTLG TAMIAFAPTY
SQIGIFATLL LVTGRLIQGM SAGGEIGTAS VFLMESSAVG NRCQSVSWQA ASQGYAALVG
AGFGLALSQL LDPSALESWG WRIPFIFGLL IGPVGWYIRT RLPETHEAAP AQKAEQGLDA
ELLKRIAQGI GLMASSTIGM YLFVFYMPTY LTTALHYPPG SAMAIACISS GCMAVICPLA
GKFADKYQLR KRLLVWTVAA PVVLTLPVFY LLGHVQHMGL AMMGVAILIL PTCIGAGAFF
ALIMEGFPKA RRSFGTSVSY SLGVTLFGGF SPLVATWLIA ALGTPLAPAY FLLAGGIVSL
ACLRYFPENK GCE
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