| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2858 |
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| Symbol | |
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| ID | 5193333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3243067 |
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| End bp | 3244380 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587308 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_001268174 |
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| Protein GI | 148548072 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATAC GCATTACCCA CCTGAGCGTT CGCGATATCC GTTTCCCCAC TTCGCTGTCG
CTGGATGGCT CCGACGCCAT GAACAGTGCC CCCGACTATT CGGCGGCCTA CGTGGTGCTG
CACACCGACG CTGCAGCCCT CGAAGGCCAC GGCCTGACAT TCACCATTGG CCGTGGCAAC
GAGATATGCG CGGCAGCGGT GCAGTCGCTG GCCCCCTTGA TCGTCGGCCT TACGCTCGAA
GAAATCAGCG CCGACATGGG CGCTTTCTGG CATCGCTTTA CCGTCAGCGA CAGCCAGTTG
CGCTGGCTGG GCCCGGAAAA GGGCGTGATC CACCTGGCCA CCGCCGCCAT CATCAACGCG
GTGTGGGACC TGTGGGCCAA GCACGAGGGC AAGCCCGTGT GGAAACTGCT GGCCGACATG
ACGCCAGAGC AGCTGGTGCG CTGCCTGGAC TTCAGCTACG TCACCGACGT GCTCACCCCC
GAAGAGGCCA TCGCCCTGCT GCGCCGCCAG GCACCGGGCA AAGCCCAGCG CGAGGCACAC
ATGCTGCGTG AAGGCTACCC CGGGTACACC ACTGCCCCGG GCTGGCTGGG CTACAGCGAA
GAGAAAATGC GCAAACTGGC CCGCGAGGCC GTGGCAGACG GCTGGACCCA CATCAAACAG
AAGATCGGGG CCGACCTGGA GGAAGACATC CGTCGCGCCA GCATCCTGCG CGACGAAATA
GGCTGGGAAC GCACCCTGAT GATGGATGCC AACCAAGTGT GGGGCGTCGA AGAGTCGGTG
GCCAACATGC GCCGCCTGGC CGCCTTCGAA CCGCTTTGGA TCGAAGAACC GACCAGCCCC
GATGACATTC TCGGCCACGC CACCATTCGC CAGCGCATTG CGCCAATCGG TGTCGCCACC
GGTGAGCACT GCCACAACCG GGTGATGTTC AAGCAGATGT TCCAGGCCGG CGCACTGGAC
TTCTGCCAGC TGGACGCAGC CCGCCTGGGC GGCCTTAACG AGGTCCTGAT CGTGCTGCTG
ATGGCCGCCA AGTACGACGT GCCGGTCTGC CCGCACGGCG GTGGCGTCGG GCTGTGCGAG
TATGTGCAGA ACATCGCGCT TTTCGACTAC ATCGCGGTGT CTGCCTCGCT GCACAACCGG
GTGCTGGAGT ATGTCGACCA CCTGCACGAG CACTTTATCG ACCCGGTGGT GATCCATCGC
GGGCGCTACA TGCCGCCACA ACGCCCTGGC TACAGCATCG AGATGCACGC TGAGACCCTG
GAACGTTATC AGTACCCCAA CGGCGCAGTG TGGCTCGACA TCAACCGTTC CTGA
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| Protein sequence | MSIRITHLSV RDIRFPTSLS LDGSDAMNSA PDYSAAYVVL HTDAAALEGH GLTFTIGRGN
EICAAAVQSL APLIVGLTLE EISADMGAFW HRFTVSDSQL RWLGPEKGVI HLATAAIINA
VWDLWAKHEG KPVWKLLADM TPEQLVRCLD FSYVTDVLTP EEAIALLRRQ APGKAQREAH
MLREGYPGYT TAPGWLGYSE EKMRKLAREA VADGWTHIKQ KIGADLEEDI RRASILRDEI
GWERTLMMDA NQVWGVEESV ANMRRLAAFE PLWIEEPTSP DDILGHATIR QRIAPIGVAT
GEHCHNRVMF KQMFQAGALD FCQLDAARLG GLNEVLIVLL MAAKYDVPVC PHGGGVGLCE
YVQNIALFDY IAVSASLHNR VLEYVDHLHE HFIDPVVIHR GRYMPPQRPG YSIEMHAETL
ERYQYPNGAV WLDINRS
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