Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2595 |
Symbol | |
ID | 5194511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2956007 |
End bp | 2956912 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640587048 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001267914 |
Protein GI | 148547812 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTCA AACAATTGCG CGCCTTTGTT GCCGTGGCCA AGTACCAGAG CTTCGCCCAG GCCGGTGAAC ACCTGCACGT TTCGCAACCG GCACTGAGCC TGACCATCAA GGCACTGGAA GAAAACCTCG GCGGCGCCCT GCTCAGCCGC ACCACGCGCA GCGTCAGCCT GACTGCCGAA GGCGAAGTGC TGCTGCCACT GGCACGCCGC CTGCTGGCCG ACTGGGACGA CACCGAAGAG ATGCTGCGTC AGCGCTTTAC CCTGCAATTG GGCCGTGTGT CAGTGGCGGC CATGCCGGCT TTTGCCGGCA ACCTGTTGCC CCACGCGCTC AAGGTGTTTC GCCAGCGCTA CCCCAAGGTC AACGTCACGG TGCACGACGT GATCAACGAA CAGGTACAGG AACTGGTACG CCATCGCCGC GTCGAACTGG GCATCGGCTT CGAGCCGGAT AACATCGATG GGCTGGACTT CCACCCGTTG TACATGGACC GCTTCGTTGC GGTAGTGGCC GCCGACTCGC CCTTGGCGCT GCTGCCCCAG GTCAGCTGGG CACAGCTGAT GGCCGAAGAT TTCGTGGCCC TGCAGCGCCC TTCGGCGGTG CGTCTGCTGA TGGAGCAGAA TGTGGCGGCC CGCCACGGCA AGCTGGCAGT CGCGTTCGAA AGCCACCAGC TGACGACCAT CGGCCGCATG GTGGCCAGCG GCCTGGGGGT CAGTGCCGTG CCGGCGCTGT GCATCAACCA GATGCAGGAG CTGGGTGCCC GCTGCGTAAC CTTGGTCGAG CCCACTGTCG AGCGGCGCAT CGGCGTGATT GCCCTCAGCG AGCACAAGCT TTCCACCGCA GCGCAGGCAC TGCTTGAGGT GCTTCTTTCC AATACCCGGA TCCCGGAGGT GACATGCGTT ACGTAA
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Protein sequence | MNVKQLRAFV AVAKYQSFAQ AGEHLHVSQP ALSLTIKALE ENLGGALLSR TTRSVSLTAE GEVLLPLARR LLADWDDTEE MLRQRFTLQL GRVSVAAMPA FAGNLLPHAL KVFRQRYPKV NVTVHDVINE QVQELVRHRR VELGIGFEPD NIDGLDFHPL YMDRFVAVVA ADSPLALLPQ VSWAQLMAED FVALQRPSAV RLLMEQNVAA RHGKLAVAFE SHQLTTIGRM VASGLGVSAV PALCINQMQE LGARCVTLVE PTVERRIGVI ALSEHKLSTA AQALLEVLLS NTRIPEVTCV T
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