Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2414 |
Symbol | |
ID | 5193059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2760384 |
End bp | 2761277 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640586871 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001267737 |
Protein GI | 148547635 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACACTC GATTTCTCGA AAGCCTGATT GCGGTAATAG AAACTGGCTC GATTGCCGCA GCTGCTCGAC GGGAAAACCT GACAGCACCT GCAGTCAGCC AACGTATACA AGCACTCGAG AAGTCACTGG CGTGCGAACT CCTGATCCGA AGCGCACACG CTGTCGAACC GACCGAGAAA TGCCTGTCAT TGCTGCCGAA GATTCGAGAT CTGATCCAGG GGGCAGCAGA GCTGAAAGAG GATCTGGACA CCAGTAGCCT GTCGGGGTAT CTCGAGATCG GTGCGATCTC TACAGCGTTG ACAGGCATAT TGCCAGAGGC CATGAATCAG CTATCAAGCA TTGCCCCGCA ACTGAGGCTA CGCATCACGC CAGGGGACTC GCGCAGACTT TACGAACAAG TAGGCTGCGG AGAGCTCGAT GCGGGAATCA TGGTATGTCC GCCCTTCACC GTCCCCAAAA CCATTCGTGT ACAGGTGCTT CGAGAAGAAC CCCTGATGCT TTTGACCAAA GACCCGATTG ACAAGCGCGA CATCCGCTCG ACGATTCTTG GTCGAAACCT GATTCGATAT GACTCAAATG CCTGGGGTGG GCAGATTGCA CAGCAGTACT TGAATGACAA TAACCTGCAA CCCGATGTCC TCTGTAATCT GGATGCGCTA GATGCAATCT ACATCATGGT CGCAAAAGGT ATGGGGGCCT CCGTCGTCCC GCTATGGGCG GGATTGAAAA CGGACGACGT ACAGGCAACA CCCGTGTCGG ACGCTGACCG CTACATGCGC CAGGTAGTCC TGCTTTACAA GTCCAACCCC AGAAGGCCTA AAGCGGTGGA GGCTTTGAAG GAACAGCTTA TGAATAACTG CAGCTTCCCA TCGATCACAC ACGCGCTGCG TTGA
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Protein sequence | MDTRFLESLI AVIETGSIAA AARRENLTAP AVSQRIQALE KSLACELLIR SAHAVEPTEK CLSLLPKIRD LIQGAAELKE DLDTSSLSGY LEIGAISTAL TGILPEAMNQ LSSIAPQLRL RITPGDSRRL YEQVGCGELD AGIMVCPPFT VPKTIRVQVL REEPLMLLTK DPIDKRDIRS TILGRNLIRY DSNAWGGQIA QQYLNDNNLQ PDVLCNLDAL DAIYIMVAKG MGASVVPLWA GLKTDDVQAT PVSDADRYMR QVVLLYKSNP RRPKAVEALK EQLMNNCSFP SITHALR
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