Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2366 |
Symbol | |
ID | 5191580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2695515 |
End bp | 2697746 |
Gene Length | 2232 bp |
Protein Length | 743 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640586823 |
Product | hypothetical protein |
Protein accession | YP_001267689 |
Protein GI | 148547587 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACTT GGTCGCGCCG TGCGCTGTTG GCCGCCGGTT TCTCTCTTAC CGTTACCAGC GCCGCGTTTG CCGCGCTGTC TGATGTCGAC CCGGGGCCCT ACACCTTCGC CACGGGTGGC TATCCGATGT GGTACAAGGA CAGCCTCGAC CAATCCCTGG AGCTGTGCCA GTCGCGTGCC ACCAGCACCC GTGCGCCAGG CGCACCAGGG GCGCCCGCCT ACATGTGCAC CTTGTTGCCC GAGCCCGGGA TCTATGACGA TGCCCTGCCG CTGGTATTTC CAGATAACTG GCCACCCGAG ATGTTCTGGT TCCTGGCCGA AACCTCGATA CCACAAGTAG GTAACAGCGG TTATGAACTG GAGGTCTACG TTGCCGGTAT AGAGGCAGCC TTCGCGGCTG AAAACCCGGT AGACGGTGAT CAGCAAAGCT TCGCCCGCAT CCGTATCCGC GCTTCGGTCC CACGCACCGG TACCTACACC ATCACGCACC CTTACGGGGT GGAGACGGTC AACGTCACCA CGGCAGGTCG TCGCGCGATC AATATCACTC GGGACATAGG CATTGGCGCT CCGGGCAACT TCCAGGGGGC GCTGGGGGGG GCGATCGGCC CTTGGCTGAA GGGGGTTGGC GGGCCGTATA CAGAGGTCAA TCCTGACACT GGCACCACCG AAACCTACAT CGGCGACCCC AATATCACCG AAGCGGTAAC CGGTAGCCCC TTCAATACCA ACTTCGTGCG CATCGAAGGG CCCGCGGGCG CCATTCAGAC CAACACGTTC ACAGTGTCTG GCAAGGTGCT GGACCCGCGA GCACAAACCC CAGTCACGCT GGAGCGCGCC ACCTACTCGC GCAACGGCAG CGGTACCCGC GTGGAAGTGT TCGCCAAGGC CCCGAGTGAG GCCAGCCTGT GTATGCGCAA TGGCCTGGCA CTGATCGGCA CCCCGCCTTC GCCTTGTCAG TTCACCCTGA CTTCGGACAA CAACGGTTTG TTCTTCAGCC AGCAGTTCAA CCAGTCGGTG CCGCCAGAGG TGGTGGTTGT CACCGCCAGC AACGCAGTCG GCGGCACCCA GCCGACTGCG CTCTCGAGCA AGCTCAGCGA CGTGGTCAAA GTCAGCACCG CACGCTACGA CTGGGCCAAC AAACGTCTGT TGATCGAGGC CAGTTCCAGC GACGAAGTAG CGGTCCCCGA CCTGCTCGCC CAGGGCTACG GCCGCCTGTC GAAATCGGGC ACACTGCAAA GCATCACGGT CAACGACCTG GCGCAACCGC CCGCCACCGT TACGGTCAAG TCTGCCCGCG GCGGTAGTGA TGTAGAGCCA GTGATCGTGG TCGGCAACGC CCCGGTCGAG GCCGCCAACC AGCCACCGCT CGCCCAGGCC GATGTCGGCA GCACCAGTGT CGGTGTACCG ATCACACTTA ACCTGCTGCT GAACGACAGC GACCCGGATG GCAACGTGCC GCTGACCATC AGCGACCTGA CCCAACCCGG GACCGGCCTT GGCGGCGTCG TGATGAATGG CACCACCTCG GTTACCTACA CGCCGCCGAC CGGGGCCACA CAACCGCTGG TAGCCAACTT CAGCTACCGG GCGGTGGATG CCAAGGGGCT GAAATCGGAA CCGGCCACGG TCACGATCAA CGTCGCACCT AACCAGGCAC CGACTGCCAA CCCGGAAACC GTCGCCACCT TGGGCGTGCC ATTGACCATC AACGTACTGG CCAACGACAC CGACCCAGAA GGCAACGTAC CGCTGAGCGT GACCAACATC ACCCAGCCGG CCACCGGCCG TGGCACGGTC AGCACCGACG GCACAACCGT CACCTATACC CCACCGGCCA CTGTAACCAC AGCCTTCACC ACCACCTTCA CCTACCAGGC ACGTGACTCG CTGGGGGGGC TGTCCACCCC AGGTACGGTC ACCGTCAACG TGTCGCCTCG GCCTGCCGCT GAAACCTTCG CCGTCACGGC AGCCACGGTC ACGGCGCGCT CCAACAACCG TTACAACTGG GACATCAGTG GCACCTCGTC GGTGACCACC GGCAATACCG TAACCGTGCG GGTAACCACG ACTACCGGCG TCCAGACCTT GGGTACGGCC ACGGTAGCGC TGACCGGCCG CTGGCGCCTG GCGGTGAGCA ATAGCACCAC GATCATCCCG ACTGCGGCAC CGACGGCGAC GATCACCACC AGCCAAGGCA CCACGCGCAC CGTCAACGTA GTCGTGCAGT AA
|
Protein sequence | MNTWSRRALL AAGFSLTVTS AAFAALSDVD PGPYTFATGG YPMWYKDSLD QSLELCQSRA TSTRAPGAPG APAYMCTLLP EPGIYDDALP LVFPDNWPPE MFWFLAETSI PQVGNSGYEL EVYVAGIEAA FAAENPVDGD QQSFARIRIR ASVPRTGTYT ITHPYGVETV NVTTAGRRAI NITRDIGIGA PGNFQGALGG AIGPWLKGVG GPYTEVNPDT GTTETYIGDP NITEAVTGSP FNTNFVRIEG PAGAIQTNTF TVSGKVLDPR AQTPVTLERA TYSRNGSGTR VEVFAKAPSE ASLCMRNGLA LIGTPPSPCQ FTLTSDNNGL FFSQQFNQSV PPEVVVVTAS NAVGGTQPTA LSSKLSDVVK VSTARYDWAN KRLLIEASSS DEVAVPDLLA QGYGRLSKSG TLQSITVNDL AQPPATVTVK SARGGSDVEP VIVVGNAPVE AANQPPLAQA DVGSTSVGVP ITLNLLLNDS DPDGNVPLTI SDLTQPGTGL GGVVMNGTTS VTYTPPTGAT QPLVANFSYR AVDAKGLKSE PATVTINVAP NQAPTANPET VATLGVPLTI NVLANDTDPE GNVPLSVTNI TQPATGRGTV STDGTTVTYT PPATVTTAFT TTFTYQARDS LGGLSTPGTV TVNVSPRPAA ETFAVTAATV TARSNNRYNW DISGTSSVTT GNTVTVRVTT TTGVQTLGTA TVALTGRWRL AVSNSTTIIP TAAPTATITT SQGTTRTVNV VVQ
|
| |