| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2055 |
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| Symbol | |
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| ID | 5191661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2325266 |
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| End bp | 2326201 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640586513 |
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| Product | catechol 1,2-dioxygenase |
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| Protein accession | YP_001267379 |
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| Protein GI | 148547277 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02439] catechol 1,2-dioxygenase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTGA AAATTTCCCA CACTGCCGAC ATTCAAGCCT TCTTCAACCG GGTGGCTGGC
CTGGACCATG CCGAAGGAAA CCCGCGCTTC AAGCAGATCA TTCTGCGTGT GCTGCAAGAC
ACCGCTCGCC TGGTCGAAGA CCTGGACATC ACCGAGGACG AGTTCTGGCA CGCCGTGGAC
TACCTCAACC GCCTGGGCGG CCGTAACGAG GCAGGCCTGC TGGCTGCTGG CCTGGGCATC
GAGCACTTCC TCGACCTGCT GCAGGATGCC AAGGATGCCG AAGCCGGCCT TGGCGGCGGC
ACCCCGCGCA CCATCGAAGG CCCGTTGTAC GTTGCCGGGG CGCCGCTGGC AGAGGGCGAA
GTGCGCATGG ACGACGGCAC TGACCCAGGC GTGGTGATGT TCCTTCAGGG CCAGGTGTTC
GATGCCGACG GCAAACCGTT GGCCGGTGCC ACCGTCGACC TGTGGCACGC CAACACCCAG
GGCACCTATT CGTACTTCGA TTCGACACAG TCCGAGTTCA ACCTGCGTCG GCGTATCATT
ACCGATGCCG AGGGCCGTTA TCGCGCGCGC TCGATCGTGC CGTCGGGATA TGGCTGCGAC
CCGCAGGGGC CAACCCAGGA ATGCCTGGAC CTGCTCGGCC GCCATGGCCA GCGCCCGGCG
CACGTGCACT TCTTCATCTC GGCACCGGGG CACCGCCACC TGACTACGCA GATCAACTTT
GCGGGCGACA AGTACCTGTG GGACGACTTT GCCTATGCCA CCCGTGACGG GCTGATCGGC
GAACTGCGTT TTGTCGAGGA TGCGGCGGCG GCGCGCGACC GCGGCGTGCA AGCAGAGCGC
TTTGCCGAGT TGTCATTCGA CTTCCGCTTA CAGGGTGCCA AGTCGCCTGA CGCCGAGGCG
CGAAGCCATC GGCCGCGGGC GTTGCAGGAG GGCTGA
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| Protein sequence | MTVKISHTAD IQAFFNRVAG LDHAEGNPRF KQIILRVLQD TARLVEDLDI TEDEFWHAVD
YLNRLGGRNE AGLLAAGLGI EHFLDLLQDA KDAEAGLGGG TPRTIEGPLY VAGAPLAEGE
VRMDDGTDPG VVMFLQGQVF DADGKPLAGA TVDLWHANTQ GTYSYFDSTQ SEFNLRRRII
TDAEGRYRAR SIVPSGYGCD PQGPTQECLD LLGRHGQRPA HVHFFISAPG HRHLTTQINF
AGDKYLWDDF AYATRDGLIG ELRFVEDAAA ARDRGVQAER FAELSFDFRL QGAKSPDAEA
RSHRPRALQE G
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