| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2052 |
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| Symbol | |
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| ID | 5195045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2322785 |
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| End bp | 2323687 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640586510 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001267376 |
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| Protein GI | 148547274 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.251194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTCC CACCATACCC TGGAGGTCTG ATGGAGCTGC GCCACCTGCG TTACTTCAAA
GTCTTGGCCG AGACCCTGAA CTTCACCCGC GCCGCCGAGC TGCTGCACAT CGCCCAGCCA
CCCCTGAGCC GGCAGATCAG CCAGCTGGAG GACCAGCTCG GCACCCTGCT GGTGGTGCGC
GAACGTCCGC TGCGGCTGAC CGAGGCCGGC CGTTTCTTCT ACGAACAGAC CTGCACCGTG
CTGCAGCAGT TGCAGAACAT CAGCGACAAC ACCCGCCGCA TCGGCCAGGG CCAGCGCCAG
TGGCTGGGCA TCGGTTTTGC GCCCTCTACC CTGTACACCG TGCTGCCGGA GCTGATCCGC
GAACTTCGCC AGGACAGCGA TCTGGAACTG GGCCTGAACG AGATGACCAC ACTGCAACAG
GTGGAGGCGC TGAAAAGCGG GCGTATCGAC ATTGGCTTCG GCCGCATTCG CATCGACGAC
CCGGTGATTC ACCAGCAGGT GCTGTGCGAG GACCCGCTGG TGGCCGTGCT GCCCAAGGGC
CACCCCCTGG CGGGCAGCCC GCTCAGTCTG GCCCAGCTGG CTGGCGAAGC GTTCATCCTC
TACCCGGCCA ATCCCCGGCC CAGCTATGCC GACCACGTGC TGGCGCTGTT CGCCCACCAC
GGCATGAGCA TTCGTGTCAG CCAGTGGGCC AACGAACTGC AGACCGCCAT CGGCCTGGTA
GCGGTTGGCG TCGGGGTGAC CCTGGTGCCA GCATCGGTAC AGCAGCAGCA CCGTCCCGAT
ATCGAGTATG TCGGCCTGCT TGATAGCGGC GCCGTCAGCC CCATCATCCT CAGCCGGCGC
AAGGGTGATG TAAGCCCGAT CGTGAAGCGG TGCCTGGCGT TGATCGAGCA ACAGGCACTC
TGA
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| Protein sequence | MNLPPYPGGL MELRHLRYFK VLAETLNFTR AAELLHIAQP PLSRQISQLE DQLGTLLVVR
ERPLRLTEAG RFFYEQTCTV LQQLQNISDN TRRIGQGQRQ WLGIGFAPST LYTVLPELIR
ELRQDSDLEL GLNEMTTLQQ VEALKSGRID IGFGRIRIDD PVIHQQVLCE DPLVAVLPKG
HPLAGSPLSL AQLAGEAFIL YPANPRPSYA DHVLALFAHH GMSIRVSQWA NELQTAIGLV
AVGVGVTLVP ASVQQQHRPD IEYVGLLDSG AVSPIILSRR KGDVSPIVKR CLALIEQQAL
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