Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2045 |
Symbol | |
ID | 5195023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2314674 |
End bp | 2315777 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640586503 |
Product | extracellular solute-binding protein |
Protein accession | YP_001267369 |
Protein GI | 148547267 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.76929 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGG TACTGAAGGT GATTGGCGGT CTGCTGCTGG CGTCTGGCGC CAGCCTGGCC CAGGCGGCAG AGGTGGACAG TGGTAACACG TTACGGTTGT ACAACTGGAC CGACTACATC GGTGAAACCA CCCTGGCCGA CTTCGAGAAG GCCACCGGCA TCAAGGTCAT CTACGACACC TTCGATGGCT ACGAAACCGT GCAGACCAAA CTGCTCACCG GCCGTTCCGG CTACGACCTG GTCATGCTCA ACGCCTCGCT GGTCCCCCCG CTGATCAGCG CCGGCGTGTT CCAGGCACTG GACAAGCAGC AACTGCCTAG CTGGCAAAAC CTCGATCAGC AGGTGGTCAA CAACCTGCAG GGCTACGACC CTGGCCTGAA GTACTCGGCG CCCTATACCT GGGGCAGCTC GGGGGTCACC TACAACGTCG ACAAGATCAC CGCGCGCATG CCCGACGCGC CGATCGGTTC GCTGGCCATG CTGTTCGACC CCAAGATCGT CTCGCGCTTC GCCGACTGCG GCGTCACCCT GATGGACGCG CCCACCGAGG TCATTCCGCT GGCCCTGCAG TACCTGGGCA AGGACCCACG CAGCGCGTCG CCTGCCGACC TCAAGGCGGC CGAGCAACTG CTGCTGGGCA TCCGCCCCTA CATTCGCAAG TTCGACTCGG TCAACTACCT CACCAGCCTG CCCAACGGCG ATGTCTGCCT GGCGCTGACC TGGTCCGGTG ACTACGCCAC CGCCCAGGCC CGCGCGGTGG AAGCGAAGAA GGACATCAAA CTGTCGTTCT TCATCCCCCA GGAAGGTTCG CTGATCTGGT TCGACAACCT GTACATCCCC AAGGATGCGC CGCACGCGGC CAACGCCCAC CGCTTCATCG AGTTTCTGCT GCAGCCGCAG ACCATGGCCA AGGTCACTGA CTACATCCAC TACGCCAACA GCAACGCCGC CGCCACCGCG CTGGTGCGTG ACGACATCCG CCAGGACCCG GCCATCTACC CCGACGCACA AACCCGTGAG CGCCTGTTCG CGCAGAAAAC CCAGAGCCCC AAGGACATGC GCGCCATCAC CCGGGTCTGG AGCACGGTCA AGACCGGTTT CTGA
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Protein sequence | MRKVLKVIGG LLLASGASLA QAAEVDSGNT LRLYNWTDYI GETTLADFEK ATGIKVIYDT FDGYETVQTK LLTGRSGYDL VMLNASLVPP LISAGVFQAL DKQQLPSWQN LDQQVVNNLQ GYDPGLKYSA PYTWGSSGVT YNVDKITARM PDAPIGSLAM LFDPKIVSRF ADCGVTLMDA PTEVIPLALQ YLGKDPRSAS PADLKAAEQL LLGIRPYIRK FDSVNYLTSL PNGDVCLALT WSGDYATAQA RAVEAKKDIK LSFFIPQEGS LIWFDNLYIP KDAPHAANAH RFIEFLLQPQ TMAKVTDYIH YANSNAAATA LVRDDIRQDP AIYPDAQTRE RLFAQKTQSP KDMRAITRVW STVKTGF
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