Gene Pput_2004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2004 
Symbol 
ID5192626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2267049 
End bp2267624 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content66% 
IMG OID640586462 
ProductCheB methylesterase 
Protein accessionYP_001267328 
Protein GI148547226 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.211499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGTG TACGTGCAGT GGTGATCGGC GCCTCCGCCG GTGGCGTGGC GGCATTGTTC 
CAGGTGCTCG GCGCGCTGCC GTCGACGTTC GCCATACCGG TGCTCTGCGT GCTGCACCTG
CCGGACGATC GCCACAGCCA GCTGGCCGGC GTGCTGCAGC GGCGGCTTCA TCGGCCGGTG
TGCGAGGCAC GTGACAAGGA GAGGATCAGC GGCGGGCAGA TCTATGTGGC AGGGCCGGGT
TACCACTTGT CGGTGGAGCG CGACCTGACG CTGTCGCTGA GCCAGGAAGA ACCCGTGCAC
TTCTCGCGCC CGGCGATCGA TTTCCTGTTC ATCTCGGCGG CCGATGCCTA CGGCGACAGC
CTGCTGGGTG TGCTGCTCAC CGGGGCCAAC GAAGACGGCG CCAGGGGCCT TGCCTACATC
AAGAACAATG GGGGGCGCAC GATTGTCCAG GACCCTCGTG ACGCACAGGT TGCCCTGATG
CCGGAGGCCG CCCTGGCCCT GCACCAGCCC GACCATATTC TTACTCTGAG CGGTATCGGG
CAGTTGCTCG CGACCCTGGA ATACAGCGCA TGCTAA
 
Protein sequence
MSGVRAVVIG ASAGGVAALF QVLGALPSTF AIPVLCVLHL PDDRHSQLAG VLQRRLHRPV 
CEARDKERIS GGQIYVAGPG YHLSVERDLT LSLSQEEPVH FSRPAIDFLF ISAADAYGDS
LLGVLLTGAN EDGARGLAYI KNNGGRTIVQ DPRDAQVALM PEAALALHQP DHILTLSGIG
QLLATLEYSA C