Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1733 |
Symbol | |
ID | 5192421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1983273 |
End bp | 1983536 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640586203 |
Product | phage transcriptional activator, Ogr/delta |
Protein accession | YP_001267073 |
Protein GI | 148546971 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000208403 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.718201 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTACTT ACAAGCTGGT TTGCCCGCAT TGCCACAGCC GGATGCGCAT ACGTACTAGC GAAGGGCGCC ATATTTTCCT GCGAATCGCT TATTTGCAAT GCACCACCGA GGCGTGTGGC TGGTCAGTGC GCGCCGAATT CGAAATGACC CATGAACTCT CCCCCAGCGG CATGCCCAAT CCGGAAGTGT ACCTGCCTTC GGCCAATGGT GATTTGCGCA AGGCCGCCTT GCCGGGCGCA GGCCAGGGCT GCCCGAGTGA GTGA
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Protein sequence | MSTYKLVCPH CHSRMRIRTS EGRHIFLRIA YLQCTTEACG WSVRAEFEMT HELSPSGMPN PEVYLPSANG DLRKAALPGA GQGCPSE
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