| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1719 |
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| Symbol | |
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| ID | 5191444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1969435 |
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| End bp | 1971375 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586189 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001267059 |
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| Protein GI | 148546957 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.244782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCTGA AAACCCAGCC ACTGGAAAAC CCCAGCCCCT CTCTTTTTCC AACCCCACCA
AGCTGTTACT GTACTCGATC AAAGCCCAAC GCCTCTGGAT CGGATGCCGA CTTGATACGT
CCCCTCCTGC TGTCACTCAG CCTGGCCTTG AGCTTTCCCG CAGCCGCGAT GGTGAGCGAA
AGCCACGGAT ACGCGCAGTT CGGCACGCTC AAGTACCCAG CCACCTTCAC CCACTTCGAC
TGGGTCAACC CGCAAGCGCC CAAGGGCGGC ACGTTGCGGG CCATGGCTTT TGGTACCTTC
GACACGCTCA ACCCCTACAC CTTCAAAGGG TCGAGCCCGA TTACCACGCC CAATTTCCAG
CAGTACGGCA TCAGTGAGCT GAACGAGCCA CTGATGGTCG GCACGGGCCA GTACGACCCG
TCCGGTGACG AGCCAACCTC CAGCTACGGC CTGATCGCCC GCTCGGTGGA GTACAGCGAG
GACCGCAGCT GGGTGGTGTT CAACCTGCGC CCCGAAGCCC GCTGGCATGA CGGCCAGCCC
ATCACCTCGG CTGACGTGGC CTTCTCGTAC CGCACGCTGC TCAAGGATGG CCACCCGATC
TACCGCACCA ACCTGCAGGA AGTGCAGCGG GTAGACATCC TCGGCCCGCT ACGCATCCGC
TTCGTGTTCA AACGCGCCGG CAACCCGCTG CTGATCCTGC GTCTGGGCGA AATGCCGGTG
CTGCCCAAAC ACTACTGGCA GAAGCGCGAC TTCAAGGCCA CCACCTTCGA GCCCCCGTTG
GGCAGCGGCC CCTACCGCAT CACCCAGGTA CAACCCGGAC GACGCCTGGT GTTTGAACGG
GTGAAGAACT ACTGGGGCAA AGACCTGGCG GTCAACCGTG GCAAGTACAA TTTCAATCGG
GTCGAATACG AGTTCTATCG CGACGCGACG GTGGCCTTCG AAGCCTTCAA GGCCGGCGAG
TTCGACATCT ATATCGAGCA CCAGGCAAAA AACTGGGCCA ACGGTTACAA CTTCCCTGCC
GTGCGCCGCG GTGAAGTGAT CAAGGCACAA ATCCCGCACA GCATTCCCAC GCAAACACAG
GGCCTGTTCA TGAACAGCCG CCGGGCCGCG TTCAGTGACC CGCGGGTACG CCAGGCGCTG
GGGCTGATGC TGGATTTCGA GTGGACCAAC CGCGCGCTGT TCAGCAGCGC CTACCGCCGC
TCGACCAGCT ACTACCCCAA CAGCGAGTTC GCCGCCAGCG GCCTGCCCAC CGGCAAGGAG
TGGCTGCTGC TGGCGCCGTT CCGAGACCAG TTGCCCGCCA AGCTGTTCAG CGAACCGTAC
AAGGTCAGCC ACACCGATGG CCGTGGCATT AGCCGTCAGA CCCTGCGCCA GGCCTTGGGC
CTGCTCGCTG AAGCCGGGTG GAAGCTGAAC GGCCAGCGCC TGGTCGACAG CAAGGGCCAG
CAGCTGCGCA TGGAGCTGCT GTTGGTAAAC CCCAACCTTG AACGCATCCT GCAACCTTAT
GTCGAAAACC TGTCCAGCAT CGGCATCGAT GCGCGCTTGC GCACCGTGGA CCGTGCCCAG
TACAAACAAC GCCTGGACCA GTTCGATTTC GACATGATTC TGATGACCCT GAACCAGACC
CTCAGCCCCG GCCTCGAACA GTGGCTGTAT TTCCATTCCA GCCAGGCCGC GACAAAGGGC
AGCAAGAACT ATGCTGGGGT CAAGGACCCG GTGGTCGACC ACCTGCTCGA CACCCTGCTC
GCCGCCCGCA CCCGCGATGA CCAGGTCGCC GCTGCCCGCG CCCTGGACCG CGTGCTTTCA
TGGCACTACT ACATGATCCC CAACTGGTAC CTCGACAACC ATCGCCTGGC CTACCGCAAC
CGGTTCGCCT TCGTCACCAC GCCGCCCTAC ACCCTTGGGC TGAACAGCTG GTGGATCAAG
ACTTCGGAGA AAGCCCAATG A
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| Protein sequence | MGLKTQPLEN PSPSLFPTPP SCYCTRSKPN ASGSDADLIR PLLLSLSLAL SFPAAAMVSE
SHGYAQFGTL KYPATFTHFD WVNPQAPKGG TLRAMAFGTF DTLNPYTFKG SSPITTPNFQ
QYGISELNEP LMVGTGQYDP SGDEPTSSYG LIARSVEYSE DRSWVVFNLR PEARWHDGQP
ITSADVAFSY RTLLKDGHPI YRTNLQEVQR VDILGPLRIR FVFKRAGNPL LILRLGEMPV
LPKHYWQKRD FKATTFEPPL GSGPYRITQV QPGRRLVFER VKNYWGKDLA VNRGKYNFNR
VEYEFYRDAT VAFEAFKAGE FDIYIEHQAK NWANGYNFPA VRRGEVIKAQ IPHSIPTQTQ
GLFMNSRRAA FSDPRVRQAL GLMLDFEWTN RALFSSAYRR STSYYPNSEF AASGLPTGKE
WLLLAPFRDQ LPAKLFSEPY KVSHTDGRGI SRQTLRQALG LLAEAGWKLN GQRLVDSKGQ
QLRMELLLVN PNLERILQPY VENLSSIGID ARLRTVDRAQ YKQRLDQFDF DMILMTLNQT
LSPGLEQWLY FHSSQAATKG SKNYAGVKDP VVDHLLDTLL AARTRDDQVA AARALDRVLS
WHYYMIPNWY LDNHRLAYRN RFAFVTTPPY TLGLNSWWIK TSEKAQ
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