| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1378 |
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| Symbol | |
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| ID | 5194493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1547914 |
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| End bp | 1549275 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640585843 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001266720 |
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| Protein GI | 148546618 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.512002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTGA ATTTCCCGCA CTTGTCTGAG GTTACCTCCG TGTTCTCCCA ATTCGCCCTG
CATGAACGCC TGCTTAAAGC CGTGGCCGAG CTTAAATTTG TCGAGCCAAC CCCGGTGCAG
GCCGCGGCCA TCCCCCTGGC CCTGCAAGGG CGGGATCTGC GTGTGACTGC GCAGACCGGC
AGCGGCAAGA CGGCGGCCTT CGTACTGCCA CTGCTCAACC GTCTGGTCGA CCTCAGCGGT
CCGCGTGTCG AGATTCGCGC GTTGATCCTG CTGCCGACCC GTGAGCTGGC CCAGCAAACC
CTCAAGCAGG TGCAGCTGTT CTCGCAGTTC ACCTACATCA AGTCGGGCCT GGTGACTGGC
GGCGAAGACT TCAAGGAACA GGCTGCCATG CTGCGCAAGG TGCCCGACGT GCTGATCGGC
ACCCCGGGCC GCCTGCTCGA GCAGCTCAAT GCCGGCAACC TCGACCTGTC CCACGTGCAG
GTCCTGATCC TGGACGAAGC CGACCGCATG CTCGACATGG GCTTTGCCGA AGACATGGAG
CGCCTGTGCA AAGAGTGCGA AAACCGCGAG CAGACTTTGC TGTTCTCGGC TACCACCGGT
GGCGCGGCCC TGCGCGACAT CATCGGCAAG GTCCTGAAAG ACCCTGAACA CCTGATGCTC
AACAGTGTCT CGCAACTGGC TGAAGGCACC CGCCAGCAGA TCATCACCGC CGACCACGAC
CAGCATAAAG AGCAGATCGC GCAGTGGTTG CTGGCCAACG AAACCTTCGA CAAGGCGATC
ATCTTCACCA ACACCCGCGC CATGGCCGAC CGCATCTACG GTCACCTGGT GGCCAAGGAC
GTGAAGGCTT TCGTGCTGCA TGGCGAAAAG GACCAGAAGG ACCGCAAGCT GGCCATCGAG
CGCTTCAAGC AGGGCAGCTC CAAAGTGCTG GTGGCGACCG ACGTGGCAGC CCGTGGCCTG
GACATCGACG GCCTGGACCT GGTGATCAAC TTCGACATGC CACGCAGCGG TGACGAGTAC
GTCCACCGTG TGGGCCGTAC CGGCCGTGCC GGTGGCGAAG GCCTGGCGAT CTCGCTGATC
ACCCACAACG ACTGGAACCT GATGTCGAGC ATCGAGCGCT ACCTCAAGCA GCAGTTCGAG
CGCCGGGTCA TCAAGGAAGT GAAGGGCACC TACAACGGGC CGAAGAAGGT CAAGGCCTCG
GGCAAGGCGG CCGGCAGCAA GAAGAAAAAG GTCGAGAAGA AGACCGGCGA CAAGAAAGCT
GCCGCCAAGC GCAAGCCTAC TGCCAAGCCG AAGGCCAACG CGCCTCTGGC CAGTGCAGAT
GGCCTGGCAC CGCTGAAGAA GCGCAAGCCT GCTGCTGAAT AA
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| Protein sequence | MQLNFPHLSE VTSVFSQFAL HERLLKAVAE LKFVEPTPVQ AAAIPLALQG RDLRVTAQTG
SGKTAAFVLP LLNRLVDLSG PRVEIRALIL LPTRELAQQT LKQVQLFSQF TYIKSGLVTG
GEDFKEQAAM LRKVPDVLIG TPGRLLEQLN AGNLDLSHVQ VLILDEADRM LDMGFAEDME
RLCKECENRE QTLLFSATTG GAALRDIIGK VLKDPEHLML NSVSQLAEGT RQQIITADHD
QHKEQIAQWL LANETFDKAI IFTNTRAMAD RIYGHLVAKD VKAFVLHGEK DQKDRKLAIE
RFKQGSSKVL VATDVAARGL DIDGLDLVIN FDMPRSGDEY VHRVGRTGRA GGEGLAISLI
THNDWNLMSS IERYLKQQFE RRVIKEVKGT YNGPKKVKAS GKAAGSKKKK VEKKTGDKKA
AAKRKPTAKP KANAPLASAD GLAPLKKRKP AAE
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