| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1234 |
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| Symbol | |
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| ID | 5193829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1400963 |
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| End bp | 1402678 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640585700 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_001266579 |
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| Protein GI | 148546477 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACCA GTCAATATTT GCTCGCCACC CAGAAAGAAA CCCCTGCCGA CGCAGTGGTC
ATCAGCCATC AGCTCATGCT GCGTGCCGGC ATGATCCGCA AACTGGCCTC CGGCCTGTAT
ACCTGGCTGC CGATGGGCTT GCGGGTAATG CGCAAGGTCG AAGCCGTGGT GCGTGAGGAA
ATGAACGCCG CCGGCGCCCT GGAGGTGCTG ATGCCGAGCA TCCAGCCCGC CGAGCTGTGG
CAGGAATCCG GTCGCTGGGA GCAATACGGC CCTGAGCTGC TGCGCCTGAA AGACCGCCAC
CAGCGTGACT TCTGCGTCGG CCCTACCCAC GAAGAAGTGA TCACCGACCT GGCCCGTAAC
GAGCTGTCCA GCTATAAACA GCTGCCGCTC AACCTGTACC AGATCCAGAC CAAGTTCCGT
GACGAAATCC GCCCGCGCTT CGGCCTGATG CGTGGCCGCG AGTTCATCAT GAAGGACGCC
TACTCGTTCC ATGCCGACCA GGCTTCCCTG CAGGAAACCT ACGACCGCAT GCACCAGGCG
TACAGCAACG TGTTCACCCG CCTGGGCCTG GACTTCCGCC CAGTGCAGGC CGATACCGGC
TCGATCGGTG GCAGCTACTC GCACGAGTTC CACGTACTGG CCGAGTCCGG CGAAGACGAC
GTGATCTTCA GCGACAGCTC CGACTACGCC GCCAACATCG AGAAGGCCGA AGCCATCCCG
CGTGAAACCG TGCGCCCTGC CCCTACCGAG GAGCTGCGCC TGGTCGACAC CCCGAATGCC
AAGACCATCG CCCAGTTGGT GGAAAACCAC GGCCTGCCGA TCGAAAAGAC CGTCAAGACC
CTGATCGTGC GCGGTGCCGA AGAGGGCAAG CTGATTGCCC TGATCGTCCG TGGCGACCAC
GAACTGAACG AAATCAAGGC CACCAAACTG GAACAGGTTG CCGACCCGCT GGTCATGGCC
ACCGAAGCCG AACTGCGCGA CGCCATTGGC GCCGGCGCCG GCTCGCTCGG CCCGCTCAAC
CTGCCACTGG AAATCATCAT CGACCGCTCG GTTGCCCTGA TGAGCGACTT CGGCATTGGC
GCCAACATCG ACGACAAGCA CTACTTCGGC GTCAACTGGG AACGCGACCT GCCGGTGCCA
CAGGTTGCCG ACCTGCGTAA CGTGGTCGAA GGCGACCCAA GCCCGGACGG CCAGGGCACC
CTGGTGATCA AGCGCGGCAT CGAAGTGGGC CACATCTTCC AGCTGGGTAC CAAGTACAGC
GAGGCATTGA AATGCCAGGT ACTGGGCGAG AACGGTAAGC CGGTGGTTCT GTCGATGGGC
TGCTACGGCA TCGGCGTTTC CCGCGTGGTC GCCGCGGCCA TCGAGCAGAG CTATGACGAC
AAGGGCATCA TCTGGAACGA CGCCCTGGCC CCGTTCCAGA TCGCTCTGGT ACCGCTGCGC
TATGAAACCG AGGTGGTCCG TGAGGCAACC GACAAGCTGT ACGCCGAACT GACTGCTGCC
GGCTTCGAAG TGCTGCTGGA CGACCGCGAC AAGAAGACCA GCCCAGGCAT CAAGTTTGCC
GACATGGAGC TGATCGGCAT CCCACACCGC ATCGTCGTCA GCGATCGCGG CCTGGCCGAA
GGCAACCTGG AGTACAAGCA CCGCACCGAG CAGGACGCCC AGGCGTTGCC GCTCAATGAA
GTGCTGACCT TCCTGCAGGC CCGCGTTCGC CGCTGA
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| Protein sequence | MRTSQYLLAT QKETPADAVV ISHQLMLRAG MIRKLASGLY TWLPMGLRVM RKVEAVVREE
MNAAGALEVL MPSIQPAELW QESGRWEQYG PELLRLKDRH QRDFCVGPTH EEVITDLARN
ELSSYKQLPL NLYQIQTKFR DEIRPRFGLM RGREFIMKDA YSFHADQASL QETYDRMHQA
YSNVFTRLGL DFRPVQADTG SIGGSYSHEF HVLAESGEDD VIFSDSSDYA ANIEKAEAIP
RETVRPAPTE ELRLVDTPNA KTIAQLVENH GLPIEKTVKT LIVRGAEEGK LIALIVRGDH
ELNEIKATKL EQVADPLVMA TEAELRDAIG AGAGSLGPLN LPLEIIIDRS VALMSDFGIG
ANIDDKHYFG VNWERDLPVP QVADLRNVVE GDPSPDGQGT LVIKRGIEVG HIFQLGTKYS
EALKCQVLGE NGKPVVLSMG CYGIGVSRVV AAAIEQSYDD KGIIWNDALA PFQIALVPLR
YETEVVREAT DKLYAELTAA GFEVLLDDRD KKTSPGIKFA DMELIGIPHR IVVSDRGLAE
GNLEYKHRTE QDAQALPLNE VLTFLQARVR R
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