Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1006 |
Symbol | |
ID | 5193499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1131429 |
End bp | 1132475 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640585464 |
Product | histidinol-phosphate aminotransferase |
Protein accession | YP_001266351 |
Protein GI | 148546249 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.533333 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTCGAT TCTGGAGCCC CTTCGTCAAG GACCTGGTGC CTTACGTGCC GGGCGAGCAA CCCAAGCTGG CCCGCCTGGT CAAACTGAAC ACCAACGAAA ACCCCTATGG CCCGTCGCCC AAGGCCCTGG AGGCCATGCG CGGCGAGCTG AACGATAACC TGCGCCTGTA CCCGGACCCG AACGGTGACC GTCTCAAGCA AGCGGTGGCC GAGTACTACG GCGTGACCCC GGCGCAAGTG TTTGTCGGCA ACGGCTCGGA CGAGGTGCTG GCGCACATCT TCCACGGCCT GTTCCAGCAC GATGCGCCCC TGCTGTTCCC GGACATCAGC TACAGCTTCT ACCCGGTGTA CTGCGGCCTG TACGGCATTG CCTTCGAACA GGTGGCGCTG GATGAGCAGT TCCAGATCCG CATTGAGGAC TACAAAAAGC CCAACGCTGG CATCATCTTC CCCAACCCCA ACGCGCCGAC CGGTTGCCTG ATGCCGTTGC AGGTGGTGGA GCAGCTGCTG CAGGCCAACC GTGATTCGGT GGTGGTGGTG GATGAGGCCT ACATCGATTT CGGTGGTGAA ACGGCGATCA GCCTGGTGGA CCGCTACGAT AACCTGCTGG TTACCCAGAC GCTGTCGAAG TCGCGCTCGC TGGCGGGGCT GCGAGTGGGC CTGGCGGTGG GGCACCCGGA CCTGATCGAG GCCTTGGAGC GGATCAAGAA CAGCTTCAAC TCCTATCCGC TTGACCGTGC AGCTATCGTC GGAGCGGCGG TGGCGTTCGA AGACCGTGAG TACTTCGAGG ACACCTGCCG CAAGGTGATA GACAGCCGGG AGGTGTTGGT TGGTCAGCTG CAGGCCAAGG GCTTTGAGGT GCTGCCGTCG GCTGCCAACT TCATCTTCGC CCGCCACCCG CAGCAGGATG CCGGCGAGCT GGCGGCACGC TTGCGCGAGC AGGGCGTGAT CGTGCGTCAC TTCAAGCAGC CGCGTATTGC CCAGTTCCTG CGGATCACCA TCGGTACGCC GGAAATGAAC CAGGCACTGC TGGATGCGTT GAGCTGA
|
Protein sequence | MSRFWSPFVK DLVPYVPGEQ PKLARLVKLN TNENPYGPSP KALEAMRGEL NDNLRLYPDP NGDRLKQAVA EYYGVTPAQV FVGNGSDEVL AHIFHGLFQH DAPLLFPDIS YSFYPVYCGL YGIAFEQVAL DEQFQIRIED YKKPNAGIIF PNPNAPTGCL MPLQVVEQLL QANRDSVVVV DEAYIDFGGE TAISLVDRYD NLLVTQTLSK SRSLAGLRVG LAVGHPDLIE ALERIKNSFN SYPLDRAAIV GAAVAFEDRE YFEDTCRKVI DSREVLVGQL QAKGFEVLPS AANFIFARHP QQDAGELAAR LREQGVIVRH FKQPRIAQFL RITIGTPEMN QALLDALS
|
| |