| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0959 |
|---|
| Symbol | |
|---|
| ID | 5190758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 1087418 |
|---|
| End bp | 1088467 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640585417 |
|---|
| Product | NADH:flavin oxidoreductase/NADH oxidase |
|---|
| Protein accession | YP_001266304 |
|---|
| Protein GI | 148546202 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.224706 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGC TTTTCGATCC GATCAAACTG GGCGACCTGC AACTGCCCAA CCGTATCATC
ATGGCCCCGC TCACCCGCTG CCGTGCCGAT GAAGGCCGTG TGCCCAATGC GCTGATGGCC
GAATACTACG TACAACGTGC CAGCGCCGGG CTGATCCTCA GCGAGGCCAC TTCGGTCAGC
CCAATGGGCG TCGGCTACCC AGATACCCCC GGCATCTGGA ACGATGAACA GGTACGTGGC
TGGAACAATG TGACAAAGGC CGTACATGCC GCGGGCGGTC GCATCTTCCT GCAGCTGTGG
CACGTGGGTC GTATCTCCCA CCCCAGCTAT CTGAATGGCG AACTGCCTGT GGCCCCCAGC
GCGATCCAGC CCAAGGGCCA TGTGAGCCTG GTGCGCCCGC TGAGTGACTA CCCTACCCCG
CGGGCGCTGG AAACCGAAGA AATCAACGAC ATCGTCGAGG CCTACCGCAG TGGTGCCGAA
AATGCCAAGG CTGCCGGTTT CGATGGTGTG GAGATCCATG GCGCCAACGG TTACCTGCTC
GACCAATTCC TGCAAAGCAG CACCAACCAG CGCACCGACC GTTACGGTGG CTCGCTGGAA
AACCGCGCGC GCCTGCTGCT GGAGGTGACC GATGCGGCCA TTGAAGTGTG GGGCGCGCAG
CGTGTAGGTG TGCACCTGGC ACCGCGAGCC GACGCCCATG ACATGGGCGA CGCCGACCGC
GCCGAGACCT TCACCTATGT GGCCCGAGCG CTGGGCAAGC GCGGCATCGC CTTCATCTGC
TCGCGGGAGC GGGAAGCCGA CGACAGCATC GGGCCGCTGA TCAAAGAGGC ATTCGGTGGC
CCGTACATCG TCAACGAGCG GTTCGACAAG GCCAGTGCCA ATGCGGCCCT GGCCAGTGGC
AAAGCGGATG CCGTGGCGTT TGGTGTGCCG TTCATCGCCA ACCCTGACCT GCCGGCACGG
CTGGCAGCGG ATGCGCCGTT GAATGAGGCG CGGCCTGAGA CTTTCTATGG CAAGGGGCCG
GTGGGGTACA TCGATTACCC GCGGTTGTAA
|
|---|
| Protein sequence | MTTLFDPIKL GDLQLPNRII MAPLTRCRAD EGRVPNALMA EYYVQRASAG LILSEATSVS
PMGVGYPDTP GIWNDEQVRG WNNVTKAVHA AGGRIFLQLW HVGRISHPSY LNGELPVAPS
AIQPKGHVSL VRPLSDYPTP RALETEEIND IVEAYRSGAE NAKAAGFDGV EIHGANGYLL
DQFLQSSTNQ RTDRYGGSLE NRARLLLEVT DAAIEVWGAQ RVGVHLAPRA DAHDMGDADR
AETFTYVARA LGKRGIAFIC SREREADDSI GPLIKEAFGG PYIVNERFDK ASANAALASG
KADAVAFGVP FIANPDLPAR LAADAPLNEA RPETFYGKGP VGYIDYPRL
|
|---|
| |