| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0674 |
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| Symbol | |
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| ID | 5193309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 758757 |
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| End bp | 759965 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640585134 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001266026 |
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| Protein GI | 148545924 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0471277 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCAT CTTCACTTCT GTACCGCTGG CACGGCACCG ACGCCAATGG CACGCCGGTC
AGCGGCCAAA CACCCGGGCG CAGCCCGGCT TATGTGCGCG CCGGGCTGAT TCGCCAGGGC
ATCACGGTGG CGAGTTTGCG GCCGTCCAGC GGGCTGGCGT TCAGCTTGCC AAAGCGGCGC
CAAAAGGCTG ACCCGGCGGG GTTCAGCCGG CAGTTGGCGA CGTTGCTCAA AGCCGGCGTG
CCGCTGCTGC AAGCGTTCGA GGTGATGGGC CGCAGTGGTT GCGATGCGGC GCAGGCGGCG
TTGCTGGAAA GATTGAAACA GGATGTGGCC TCGGGCCTGG GGTTGGCGGA TGCGTTGCAG
CGTCACCCGG CATGGTTCGA TGCGCTGTAT TGCAACCTGG TACGGGTGGG CGAGCAGTCC
GGTACGCTCG ACCGGCAGCT GGAGCAGCTG GCCGGCATGC TGGAACAGCG TCGGGTGCTG
CACAAGAAGG TGCGCAAGGC GATGATCTAC CCGCTGCTGC TGTTGCTGAC CGGGCTGGGG
GTGTCGGCAA TCTTGTTGCT GGAGGTTATT CCCAAATTCG AGAGCATGTT CTCGGGCATG
GGTGCGGCGT TGCCGGCATT TACCCAATGG GTGATCAACT TGTCCACAGG GCTGAGCCGG
TTTGCGCCGC TGCTGCTGGT GATGGGCGTG GTGCTGGGTG TTGCCGTGCG CCAGCTTTAC
CGGCAGCACG CGCCAGCGCG CCTGTGGATA TCTCGACGGG TGCTGGGCTT GCCCGTGTTT
GGCAAGTTGC TGGGGCAGGC CGCGCTGGCG CGGTTTGCGC GCAGCCTGGC AACGTCCTAC
GGCGCCGGGG TGCCGTTGCT GGATGCGCTG GGGACGGTGG CGCGGGTAAC AGGTGGCGAC
CTGCACGAGC AGGCGGTGTT GCGGCTGCGC CAAGGCATGG CCAATGGGCA AGGGCTGAAC
CAGGCGATGG CCGGTGAACC GTTGTTTCCC CCCTTGCTGG TGCAGTTGAC GGCCATCGGT
GAATCCAGCG GCACGCTGGA CCAGATGCTG GAAAAAGCCG CCAGCCATTA CGAGGAACAG
GTCAGCCAGG CGCTGGACCA GTTGACCAGC CTGCTGGAGC CGGCCATCGT GCTGATCCTG
GGCTTGCTGG TGGGTGGCCT GGTGGTGGCG ATGTACCTGC CGATCTTCCA GTTGGGTAGT
TTGATCTGA
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| Protein sequence | MTSSSLLYRW HGTDANGTPV SGQTPGRSPA YVRAGLIRQG ITVASLRPSS GLAFSLPKRR
QKADPAGFSR QLATLLKAGV PLLQAFEVMG RSGCDAAQAA LLERLKQDVA SGLGLADALQ
RHPAWFDALY CNLVRVGEQS GTLDRQLEQL AGMLEQRRVL HKKVRKAMIY PLLLLLTGLG
VSAILLLEVI PKFESMFSGM GAALPAFTQW VINLSTGLSR FAPLLLVMGV VLGVAVRQLY
RQHAPARLWI SRRVLGLPVF GKLLGQAALA RFARSLATSY GAGVPLLDAL GTVARVTGGD
LHEQAVLRLR QGMANGQGLN QAMAGEPLFP PLLVQLTAIG ESSGTLDQML EKAASHYEEQ
VSQALDQLTS LLEPAIVLIL GLLVGGLVVA MYLPIFQLGS LI
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