Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0601 |
Symbol | |
ID | 5194257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 671745 |
End bp | 673706 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640585053 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001265953 |
Protein GI | 148545851 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTGA AGTGGCTGAC CAATTTCAAC ACCCTATTGC TGGTGACCGT GTGTATCGCC TTGGGCGCCA CCCTGTGGTG GTCGCAGCGC GCCCTCGAGC GCCCCTACCA GCTGATGGAG CGCTATCTGG GCCTGTCTCA GCAGTTCCAG AACCAGACGG CGCGCAATAT CCAGGCCTAC CTGGGCAGCG GCGATGCCCT GCGTCAGGCC GCAGCCATGG AGGCGACCCA GCAGTTGCAG GCCGCACTGA CGGATTGGCC CGTAGAGCTG GCCGAGAAGT TGCGCCCCAG CCTGGATAGC CTGCAGGCCT TCACCGCCAA CGAACTGCTG GCCGCCGGTA AGCTGGCCGG CGACCCACAA GCCCTGCTGC TGCAAGCCGA GCGGGAGCTG GGGGCGAACT TCGAGCAGAT GGCCAGCTAT GCCCGCGACA GTGGCAACGC CGAGGCCAAT CGCTACTTGC TGCCCTTGCT CGACGCCACC CTGCACCTGG GGCGGCTGTC ATTGGCTCGC GACAAGCTGG TCAGCAGCGG CCGCCCGGAG CTGGCCGATG AGGTGGAGCG CGAGCTGCAA CTGATCCGCG CCCAGGCCCA AACGGTCGAC GGCCTGCCAC TGCTCGGCGT AACCCGCACG GCCGAATCCG GTGCCGACGA CTTCGCTGCA ATGATGGGCC TGGAATCCCG GGCCAGTGCC CAGCAGGAAG ACATTGCCGT AGGCCTGAAG CGTGAATTGC AAAGCCTGCT CAACCGCTAC CCGGCCGAAC TGCAACGCAC CCGCGAACAG ATCGAGCGCC GCGTCGCGCT GGCCGCCACC ACCGGCCAGC GCCTGGAAGC CGTACAACAG GCCATCGCCG CGCTGGAACC CGAAGTGCGC GGCCAGCATG CGAAAATCGC TGCCGAGGTG CGCATCATCC AAGGCCTGAT GATCGGCCTG ATCCTGCTGA TCGCCCTACT GATCGACACG CTGCAACGGC GCCTGGCAGG TACCCTGACC GGACTGGCCC CGGCCCTGTC GTGCTGGGCT GAGGGCGACT TCGCCCAAGC CATCGCCCTG GGCAAGACCA ACCGCGAACT GCACGACATC CAGGAGTCGC TCAACCGCCT GCGTCAGTAC CTGGTGGAGC TGGTCGGCAC CATCCGCCAT AACGCCGAGC AGGTGGCCGG CAGCAGCCAC GCCCTGGCCG GCATGAGCGC TGCGCTGCAC GGCGGCGCCG AGCGCCAGGC CGGCGATACC GGGCAGATCC GCGATGCCTT GGGCGAGCTG GAAGCGACCA TTCAACAAGT GGCTGGTGAT GCCAGCGCAG CCGCCGAGGC CAGCCGCGAT GCCGGGCGTG CGGTGGAACA AGGCCAGGCG GTAATCGGCC AAAGCCTGTC GGGCTTGCGT GAGCTGGTCG ATGAAGTGCA AGGCAACGCC CGCATGATCG AACAATTGGC GGAAGAGTCG GCCACCATTG GCGGGGTACT GACGGTGATC CGCGCGATTG CCGAGCAGAC CAACCTGCTG GCACTGAATG CCGCGATCGA AGCGGCCCGT GCCGGCGAGA TGGGCCGTGG CTTTGCCGTG GTCGCCGATG AGGTGCGCTC ACTGGCTCAG CGCACCACGG GGGCTACCGG CGAGATCCAG GCGTTGATCG ACCGCCTGCA GCAGGCCGCC AGAAGTTCGG TGGCGGGGAT GCGCGCGCAA CTGGAACATG CCGAGGCCAC GGCCAACCAA GCCCAGGCGG CGGATGGGGC ACTGGATGAG ATTGTCTGTG CCATTCGTAC CATTGCCGAT ACGGCGGTGC GGATTGCCGA TGTCACGGCG CAGCAGAGTG GCGCGGTGAG CGAGATTCGT GACCACAGCG AGCGGATTCA CGCGTTGGGT GAAGACAACC TGCAGCGCAT TGGCGAGGGG CGTGAACAGG GCGAACAGCT GCTGAGCCTG GGCGGTGAGC TGAACCGGGC CGTGCGAGCA TTCAGGGTCT GA
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Protein sequence | MRLKWLTNFN TLLLVTVCIA LGATLWWSQR ALERPYQLME RYLGLSQQFQ NQTARNIQAY LGSGDALRQA AAMEATQQLQ AALTDWPVEL AEKLRPSLDS LQAFTANELL AAGKLAGDPQ ALLLQAEREL GANFEQMASY ARDSGNAEAN RYLLPLLDAT LHLGRLSLAR DKLVSSGRPE LADEVERELQ LIRAQAQTVD GLPLLGVTRT AESGADDFAA MMGLESRASA QQEDIAVGLK RELQSLLNRY PAELQRTREQ IERRVALAAT TGQRLEAVQQ AIAALEPEVR GQHAKIAAEV RIIQGLMIGL ILLIALLIDT LQRRLAGTLT GLAPALSCWA EGDFAQAIAL GKTNRELHDI QESLNRLRQY LVELVGTIRH NAEQVAGSSH ALAGMSAALH GGAERQAGDT GQIRDALGEL EATIQQVAGD ASAAAEASRD AGRAVEQGQA VIGQSLSGLR ELVDEVQGNA RMIEQLAEES ATIGGVLTVI RAIAEQTNLL ALNAAIEAAR AGEMGRGFAV VADEVRSLAQ RTTGATGEIQ ALIDRLQQAA RSSVAGMRAQ LEHAEATANQ AQAADGALDE IVCAIRTIAD TAVRIADVTA QQSGAVSEIR DHSERIHALG EDNLQRIGEG REQGEQLLSL GGELNRAVRA FRV
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