Gene Pput_0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0556 
Symbol 
ID5191361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp621205 
End bp621948 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content61% 
IMG OID640585008 
Producthypothetical protein 
Protein accessionYP_001265908 
Protein GI148545806 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTAA GGACTGTACT GCTGGCAATG CTGCTGAGTA TTGCCCCGTG GGTAACAGCT 
GCCGAGGGCA TCCCGAAACA GATCCATCTG GTTAGCGAGG AGTGGCTCGA CTACACCAAT
GCCGACGGTA CCGGGGTGGC CTGGGATGTG CTGCGCAAAG TGTTCGAGCC GGCCGGCGTC
GAAGTGGTTA CCCAGAGCGC GCCCTACAGC CGGGCGGTTG GCCTGGTCAA GCGCGGCGAG
GCTGATGCCT GGGTTGGCTC GTACAAGGAA GAGAACGACG ACAACCTGTA CCCGCGCTGG
CACTTCGACA TGGACCACAT CTATGCCCTG GGGCTGGCCA GCAAACCTGC GCCTACCCTG
GATACCATCG GCAAGTACCG GTTGGCTTGG GTGCGTGGTT ATGATTACGG CAGCTACTTG
CCTAATGTGC GTGAATTCCG CGAAATCCAG CGTCGCGAGG GCATTTTGCC GATGCTCGAG
CATGACCGGG TGGACTACTA CATCGACGCA CTGACCGAGG TCGACTACGT GCTAGGGCAA
GCCTCCCAGC CTGAGCGCTT CCGCCGTACC CACGTGGCCG AGTTGCCGTT GTACCTGGCT
TTTGCCCGTA ACGACCAGGC CAAGGCCCTC TGCGACCTGT TCGACAAGCG CATGAAGGAG
CTGGTGCGTA GCGGCGAACT GAAACCGATT TTCGAGCACT GGAAACAGCC CTATCCGTTC
AACGCGGGTA GTCACCCGCA CTGA
 
Protein sequence
MAVRTVLLAM LLSIAPWVTA AEGIPKQIHL VSEEWLDYTN ADGTGVAWDV LRKVFEPAGV 
EVVTQSAPYS RAVGLVKRGE ADAWVGSYKE ENDDNLYPRW HFDMDHIYAL GLASKPAPTL
DTIGKYRLAW VRGYDYGSYL PNVREFREIQ RREGILPMLE HDRVDYYIDA LTEVDYVLGQ
ASQPERFRRT HVAELPLYLA FARNDQAKAL CDLFDKRMKE LVRSGELKPI FEHWKQPYPF
NAGSHPH