| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0519 |
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| Symbol | |
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| ID | 5192305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 586755 |
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| End bp | 588137 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640584973 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001265873 |
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| Protein GI | 148545771 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.481515 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGGTTC CCCAATACAG CCATCAAACA CAGCCGGTTT ACCTGATGAT CGCTGATGCC
CTTGAACAGG ACATCGAACG TGGTCGGCTT GCAGAGGGTG ATCGCTTACC CACGCTCAAG
GACCTGGCCG AGGCGCTGAA TGTAACCCCC GGCACGGTTG GCAGGGCCTA CGACGAAGCA
GCCAAGCGTG GTTTGGTGGC TGGCGAGGTA GGCCGAGGCA CATTTGTCAG GCAACTGCGG
CAGCCATTAC CCGCCCCGTC GGTGCCCACA CCCGTTGCCG GCGAAAGTAG CCAGATCGAC
CTCTCGATCA TCAAGCCCAA CGACGCTCAC ATGAGCGAGT GGCTAGGCAC GGCTATCCGC
GAACTGGCCG CCTCCTCGGA CTTGGGGCAG GTACTCGACT ATGTGACAGA AGGTGGCCAC
ACGTCCCACA AACAAGCCGG TGCGACCTGG ATACAGCGCT GGCTGCCTGA TGCTCGCTGG
CAGCAGGTGG TACTGACCGC TGGCGCCCAG CATGGGCTGC TGGTGGCCAT CAGCAGCCTG
TCGAAGAGTG ACGATGTGGT GCTGTGCGAG TCGCTCTGCT ACCCGGGCAT CATATCCCTG
GCCCACAGCC TGGGCCGGCG CCTGCGCGGC GTCGCCATGG ACGAACACGG GCTCATCCCG
GAGGCATTGC GCGCGGCCTG CCTGGAACAC CGCCCTTCCC TGCTGGTGTG CGTCACCACG
CACCAGAACC CGACCAACTC GATCATGCCC CCAGCAAGGC GTCAGGCTAT CGCCGAGATC
GCCCGTGAGT TCGACCTGTT CATCGTGGAT GACGATATCT ACGGTTTTCT CGAGCCCGAC
CCGGGCTACA AGCCGCTTGC AGCGTATGCG CCTGAACGCT CGGTGTACCT CACCAGCCTG
TCCAAAAGCG TGCTGCCGGC ACTGCGCATC GGCTACCTGT ACGCCCCGCC GCAAACCCTG
TCGCGGTTAT CATCGATGGT ACGCAGCAGC GTGTGGATGC CATCGCCACT GATGGCGCAA
CTGGCCAGCA ACCTGATCAA CAGCGGCAAG GCCGACCAGC TGGTGCGTAT GCAGCAACAG
GAGGCGGCCG CGCGCCAGCA CATGGCCCGG GAGATTCTTG GCCAATACAA GATCCGCACC
CAGCCTCACA GCTTCCATAT CTGGCTGGAG CTGCCAGAAC CGTGGACCAG CGACGAGTTT
GCCAACCTGG CGCGTGATAA CGGCGTAACG GTGGTCAGCG GCAGCCAGTT CCTGCCAGAA
CGCAGCCACC CCACCAGCGG TGTGCGCATC GCCCTGATGG CACCCAGCCG CCAGGCACTG
GGCTTTGCCC TGACCAAGCT GGCAAGCCTG CTGGATTCGG CGGAGCCGCG GTTGTTCTAC
TGA
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| Protein sequence | MWVPQYSHQT QPVYLMIADA LEQDIERGRL AEGDRLPTLK DLAEALNVTP GTVGRAYDEA
AKRGLVAGEV GRGTFVRQLR QPLPAPSVPT PVAGESSQID LSIIKPNDAH MSEWLGTAIR
ELAASSDLGQ VLDYVTEGGH TSHKQAGATW IQRWLPDARW QQVVLTAGAQ HGLLVAISSL
SKSDDVVLCE SLCYPGIISL AHSLGRRLRG VAMDEHGLIP EALRAACLEH RPSLLVCVTT
HQNPTNSIMP PARRQAIAEI AREFDLFIVD DDIYGFLEPD PGYKPLAAYA PERSVYLTSL
SKSVLPALRI GYLYAPPQTL SRLSSMVRSS VWMPSPLMAQ LASNLINSGK ADQLVRMQQQ
EAAARQHMAR EILGQYKIRT QPHSFHIWLE LPEPWTSDEF ANLARDNGVT VVSGSQFLPE
RSHPTSGVRI ALMAPSRQAL GFALTKLASL LDSAEPRLFY
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