Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0435 |
Symbol | ksgA |
ID | 5192479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 501543 |
End bp | 502346 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640584879 |
Product | dimethyladenosine transferase |
Protein accession | YP_001265789 |
Protein GI | 148545687 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.896939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAGC AATACCAACA CCGGGCGCGC AAGCGCTTCG GCCAGAACTT CCTGCACGAC GCCGGTATCA TCGACCGCAT CCTGCGTGCC ATCAACGCCA AGGCCGGCGA ACACCTGCTG GAAATCGGTC CGGGCCAAGG CGCCCTGACC GAAGGCCTGC TGGGCAGTGG CGCACAGCTG GACGTGGTGG AGCTGGACAA AGACCTGGTG CCGATCCTGC ACCACAAGTT CGCTGATCGC AGCAACTTCC GCCTGCACCA AGGTGACGCC CTGAAGTTCG ACTTCAACCA GCTGGGCGTG CCGCCGCGCA GCCTCAAGGT GGTTGGCAAC CTGCCCTACA ACATCTCCAC CCCGCTGATC TTCCACCTGC TCAGCCACGC CGGGCTGATC CGCGACATGC ATTTCATGCT GCAGAAGGAA GTGGTCGAGC GCATGGCCGC CGGCCCTGGC GGCGGTGACT GGGGGCGCTT GTCGATCATG GTGCAGTACC ACTGCCGCGT GGAGCACCTG TTCAATGTCG GCCCTGGTGC CTTCAACCCA CCCCCGAAAG TGGATTCGGC AATCGTCCGC CTGGTGCCGC ACGAAGTGCT GCCGTTCCCG GCCAAGGACC ACCTGCTGCT GGAGCGTGTC GTTCGCGAAG CGTTCAACCA GCGCCGCAAG ACGCTGCGCA ACACCATGAA AGGCCTGCTG GACAGCGCCG CCATCGAGGC TGCCGGCGTT GATGGCAGCC TGCGCCCTGA ACAGCTCGAC CTGGCAGCCT TCGTGCGCCT GGCAGACCAG CTGGCGGATC AGCAACAAGC CTGA
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Protein sequence | MNEQYQHRAR KRFGQNFLHD AGIIDRILRA INAKAGEHLL EIGPGQGALT EGLLGSGAQL DVVELDKDLV PILHHKFADR SNFRLHQGDA LKFDFNQLGV PPRSLKVVGN LPYNISTPLI FHLLSHAGLI RDMHFMLQKE VVERMAAGPG GGDWGRLSIM VQYHCRVEHL FNVGPGAFNP PPKVDSAIVR LVPHEVLPFP AKDHLLLERV VREAFNQRRK TLRNTMKGLL DSAAIEAAGV DGSLRPEQLD LAAFVRLADQ LADQQQA
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