Gene Pput_0293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0293 
Symbol 
ID5194840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp338217 
End bp338540 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content53% 
IMG OID640584738 
Producthypothetical protein 
Protein accessionYP_001265651 
Protein GI148545549 
COG category[S] Function unknown 
COG ID[COG5606] Uncharacterized conserved small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000404115 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.251611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTTC AATTCCACGA AAGCCCTTTC CACGCCACCC ACGACGCAGA TACCGCCAGC 
AAAATGGCCT TGAAAATGGA CTTGTCCATT TTCATCACTG ACTGCATCAA AAAAATGGGC
CTCAAACAGC ATGATGCCGC AGCCAAGCTG AACGTAACCC AATCCCGCAT ATCCGAGCTT
GCAAATGGCA AGATCGAGAA ATTCACCTTG GACGCCATGA TGGACATGCT GGACAAGCTC
GGCTTTCGCA CAACCCTGAC CCTGCCCTCG AACGATGCCG GTTCACCGCC CCAGATCGTG
ATCACTCAAA CGCCTGGCAG CTAA
 
Protein sequence
MALQFHESPF HATHDADTAS KMALKMDLSI FITDCIKKMG LKQHDAAAKL NVTQSRISEL 
ANGKIEKFTL DAMMDMLDKL GFRTTLTLPS NDAGSPPQIV ITQTPGS