| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0094 |
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| Symbol | |
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| ID | 5195171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 101022 |
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| End bp | 101921 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640584535 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001265453 |
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| Protein GI | 148545351 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR03418] putative choline sulfate-utilization transcription factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.686241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGACC ACCTTGCCGG ATTGTCGCTG GATACCCTGC GCGTATTCGA GGCTGCTGCA
CGCCTGCGTG GCTTTACCGC TGCGGCGCTG GAGTTGGGTA CCACGCAGCC GGCAGTGAGC
CAGCAGGTGA AGCGCTTGGA GGCACAGTTG GGCACGCGCC TGTTTGACCG CATTTACCGG
GGCATCGAGC TGACCGAGGC TGGCCAGGTG CTGTTCGAAC AGGTGCATCA GGGGCTGCAG
ACCATGGATG ACGGTATTGC CCAGGCCAGC GGGCGCGGCC AGCGCGAAGT GCTGCAGGTC
GCCACTGACT TTGCCTTTGC GGCGTTCTGG TTGATGCCAA GGCTGCAACG CTTTCATCAG
GCTTATCCAC AGGTGGATGT GAGCCTGGTG ACGGGTGAGC GCAGCCAGGG CATGTTGCGC
CCGGACATCG ATGTGGCGGT GCTGTTTGGC GATGGACGCT TTCACCAAGG AGAAAGCCGC
TGGCTATTCG ATGAGGAAGT GTTCCCGGTG TGCAGCCCCC ATTTGATTCA TGGCAAAGCC
TTGTCAGCTG TGGCTTTGCA ACGATTGCCG CTGCTGCATC TGAAGGGCGA GCAGGCCAGC
CGCTGGTTTG ACTGGGCGGG GGTATTTCGT GGGTTTGGTG TGGACAGCCC ACCGCCGGCG
GGGCAGTTGC GGTTTGATAA CTATACCTTG CTGATTCAGG CAGCGATTGC CGGGCAAGGG
GTGGCGATTG GCTGGGCTCA CCTGGTGGAT GGATTGGTGG AGCAAGGGTT GCTGTGTCGG
CCGCTGGAGG GGAGTTTGCG CTCGGAACGC GGCTATTACG CAGTTTTGCC ACCGCGCAAG
CGGCGGGGAG CGTTGATCGA GCGGTTCGTG GATTGGTTGG AGCAGGAGCG CAGCCTTTGA
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| Protein sequence | MFDHLAGLSL DTLRVFEAAA RLRGFTAAAL ELGTTQPAVS QQVKRLEAQL GTRLFDRIYR
GIELTEAGQV LFEQVHQGLQ TMDDGIAQAS GRGQREVLQV ATDFAFAAFW LMPRLQRFHQ
AYPQVDVSLV TGERSQGMLR PDIDVAVLFG DGRFHQGESR WLFDEEVFPV CSPHLIHGKA
LSAVALQRLP LLHLKGEQAS RWFDWAGVFR GFGVDSPPPA GQLRFDNYTL LIQAAIAGQG
VAIGWAHLVD GLVEQGLLCR PLEGSLRSER GYYAVLPPRK RRGALIERFV DWLEQERSL
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