Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4425 |
Symbol | |
ID | 6113395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4890094 |
End bp | 4891776 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641624220 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_001751274 |
Protein GI | 170723586 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCAGA CCCGCATCAT CAAGCCCGCC GAGGGCGCCT ACAGCTTTCC TCTGCTGATC AAACGCCTGC TGATGTCCGG CAGCCGCTAT GAAAAGACCC GCGAGATCGT CTACCGCGAT CGGTTGCGGC TGACTTATCC ACAGCTCAAC GAGCGTATTG CCCGCCTGGC CAACGTGCTG ACCGAAGCCG GGGTGAAGGC CGGTGACACC GTGGCGGTGA TGGATTGGGA CAGCCACCGT TACCTGGAAT GCATGTTCGC CATCCCGATG ATCGGCGCGG TGGTGCACAC CATCAACGTG CGCCTGTCGC CTGAGCAAAT CCTCTATACC ATGAACCACG CCGAGGACCG CTTCGTACTG GTCAACAGCG ATTTTGTCGG CCTTTACCAG GCCATTGCCG GGCAGTTGAC CACGGTCGAC AAGACCCTGC TGCTGACTGA TGCCCCGGAC AAGACCGCCG AGCTGCCGAA CATGGTGGGC GAGTACGAGC AGTTGCTCGC GGCGGCCAGC CCGCATTACG ACTTCCCTGA CTTCGACGAG AACTCGGTCG CCACCACGTT TTACACCACC GGCACCACAG GAAACCCTAA GGGCGTCTAC TTCACGCATC GCCAGTTGGT GCTGCATACC TTGGCCGAGG CCTCGGTGAC CGGCAGTATC GACAGCGTCC GCCTGCTTGG CAGCAATGAC GTGTACATGC CCATCACGCC CATGTTTCAC GTGCATGCCT GGGGCATCCC GTACGCGGCC ACCATGCTCG GTCTGAAGCA GGTGTACCCG GGCCGCTACG AGCCCGACAT GCTGATCAAG CTCTGGCGGG ACGAGAAGGT CACCTTCTCG CACTGCGTAC CCACCATCCT GCAGATGTTG CTCAATTGTC CCAGCTCCCA AGGCCAGGAC TTCGGCGGCT GGAAGATCAT CATCGGTGGC AGTGCGCTCA ACCGCTCGCT TTATCAAGCG GCGCTGGCCC GGGGCATTCA GCTGACCGCG GCCTATGGCA TGTCCGAGAC GTGCCCGCTG ATTTCTGCCG CGCACCTGAA CGATGAGCTG CAGGCCGGCA GCGAAGACGA ACGCGTGACC TACCGCATCA AGGCAGGTGT CCCGGTGCCG CTGGTGGAGG CAGCGATCGT CGATGGCGAT GGCAATTTCC TTCCGGCCGA CGGCGAGACC CAAGGCGAAC TGGTACTGCG TGCCCCGTGG TTGACCATGG GGTACTTCAA GGAGCCGGAG AAAAGCGAGG AGCTGTGGCA GGGCGGCTGG CTGCATACCG GTGACGTCGC CACCCTGGAT GGCATGGGTT ACATCGACAT CCGTGACCGT ATCAAGGACG TGATCAAGAC GGGGGGGGAG TGGATCTCCT CTCTGGACCT TGAGGACCTG ATCAGCCGAC ACCCTGCTGT GCGCGAGGTT GCGGTGGTTG GGGTTGCCGA CCCGCAGTGG GGCGAGCGGC CGTTTGCCCT GCTGGTGGTG AGCGACGGCC AGGTCGTCGA TGCCAAGGCG TTGAAGGAGC ACCTCAAACC GTTTGTAGAG CAAGGGCACA TCAACAAGTG GGCGATTCCC TGCCAGATCG CCGTTGTTAC AGAAATTCCC AAGACCAGTG TCGGAAAACT CGACAAGAAG CGCATCCGCC AGGACATCGT CCAGTGGCAG GCCAGTAACA GCGCCTTCCT TTCCACGCTG TAG
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Protein sequence | MLQTRIIKPA EGAYSFPLLI KRLLMSGSRY EKTREIVYRD RLRLTYPQLN ERIARLANVL TEAGVKAGDT VAVMDWDSHR YLECMFAIPM IGAVVHTINV RLSPEQILYT MNHAEDRFVL VNSDFVGLYQ AIAGQLTTVD KTLLLTDAPD KTAELPNMVG EYEQLLAAAS PHYDFPDFDE NSVATTFYTT GTTGNPKGVY FTHRQLVLHT LAEASVTGSI DSVRLLGSND VYMPITPMFH VHAWGIPYAA TMLGLKQVYP GRYEPDMLIK LWRDEKVTFS HCVPTILQML LNCPSSQGQD FGGWKIIIGG SALNRSLYQA ALARGIQLTA AYGMSETCPL ISAAHLNDEL QAGSEDERVT YRIKAGVPVP LVEAAIVDGD GNFLPADGET QGELVLRAPW LTMGYFKEPE KSEELWQGGW LHTGDVATLD GMGYIDIRDR IKDVIKTGGE WISSLDLEDL ISRHPAVREV AVVGVADPQW GERPFALLVV SDGQVVDAKA LKEHLKPFVE QGHINKWAIP CQIAVVTEIP KTSVGKLDKK RIRQDIVQWQ ASNSAFLSTL
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