Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4394 |
Symbol | |
ID | 6113364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 4850393 |
End bp | 4851727 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641624189 |
Product | outer membrane porin |
Protein accession | YP_001751243 |
Protein GI | 170723555 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.461784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTTCCG CGTTTCGTGT TACCCCGCTG TTCATTGCAT TGACCGCAAC GATGCCTTTC GCCGCCCAGG CAGATGAAGA CAAGGCTGAT GGCTTCATCG AAGGCTCGTC CTTCAACCTG CATTTTCGTA ACGCCTACTT CAACCGCGAC AACCACAACA GCGGCGTGCG CGACACCCGC GAGTGGGGCC AAGGCGCGGT TGCCCGCTTC GAGTCGGGCT ACACGCCAGG CGTAATCGGC TTTGGCCTCG ATGCGCACGC CATGCTGGGC TTGAAGCTCG ATGGCGGTGG CGGCCATGCC GGCACCAGCA TCCTGCCCGA ACACGTGAAG GACAACGGCG AACTGGGCGC CGCCCCGCAC TCGTTCTCCA CCGCAGGCGC GGCGGTCAAG CTCAAGGCCT TCGACACCGA ACTCAAGGCC GGTGACCTGT TCCTTACCAA CCCGGTGATC GCCGGCGGCG AAACCCGCAT GCTGCCGCAG ACCTTCCGTG GCGTCAGCCT GACCAATACC AGCATCGACG GCCTGCTGCT CGAAGGTGGC CAGGTCAGCT TCACCAAGCC GTACAACCAG AGCGGCCACC GCCGTATCGA CACCTACTAC GGCTCGCTGG ATGAGCACGA CAAAAGCAAG CATCTGAACT GGGCTGGTGC GTCGTGGAGC GGCACCGAGA ACATCACTGC CAACCTTTAC GCCGCCGAGC TGAAGGATAT CTGGAACCAG TACTACGCTG ATTTCGACTA CACCTACGTG GTCAACGACC TGGTCAGCCT CAACCCGGGC GTGCACTTCT ACCACACCCA AGACACCGGC CAGGCGCTGC TGGGCAAGAT CGACAACAAT ACCTACAGCG TGCACTTCAC CGTCAATGCC GGCTATCACA GCGTTACTGC CGCCTACCAG CGGGTCAATG GCGACACGCC GTTCGACTAC ATCAACCTGG GCGACAGCGT GTACCTGGAC AACTCGCGCA TGTACTCGGA CTTCAACGCG CCCAACGAGC GTTCGTGGAA GCTGCAGTAC GGCTATGACT TCGCCGGGCT CGGCATGCCA GGGCTGACCA CCACCGTGTC GTACTCGCGT GGCGAGGCGG ACCTGACCAA GGCTGACCAG GGCAACACCC ACTACGACTA CTACCGCGCC GACGGCAAGA ACGCTCAGCA CTGGGAACGT GACCTGGACG TGAAATACGT GTTCCAGCAA GGCGACTTCA AAGACCTGTC GGTGCTGGTG CGTTATGCCG TACACCGCGG CGGCCAGGGC TATGCGTCGA TCGACAGCAA CAGCGATAAC GACGAACTGC GGGTGATCGT CGATTATCCG TTGAACGTGT TCTGA
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Protein sequence | MPSAFRVTPL FIALTATMPF AAQADEDKAD GFIEGSSFNL HFRNAYFNRD NHNSGVRDTR EWGQGAVARF ESGYTPGVIG FGLDAHAMLG LKLDGGGGHA GTSILPEHVK DNGELGAAPH SFSTAGAAVK LKAFDTELKA GDLFLTNPVI AGGETRMLPQ TFRGVSLTNT SIDGLLLEGG QVSFTKPYNQ SGHRRIDTYY GSLDEHDKSK HLNWAGASWS GTENITANLY AAELKDIWNQ YYADFDYTYV VNDLVSLNPG VHFYHTQDTG QALLGKIDNN TYSVHFTVNA GYHSVTAAYQ RVNGDTPFDY INLGDSVYLD NSRMYSDFNA PNERSWKLQY GYDFAGLGMP GLTTTVSYSR GEADLTKADQ GNTHYDYYRA DGKNAQHWER DLDVKYVFQQ GDFKDLSVLV RYAVHRGGQG YASIDSNSDN DELRVIVDYP LNVF
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