| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_3930 |
|---|
| Symbol | |
|---|
| ID | 6112894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 4364204 |
|---|
| End bp | 4364959 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641623719 |
|---|
| Product | NLP/P60 protein |
|---|
| Protein accession | YP_001750779 |
|---|
| Protein GI | 170723091 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAAAC ACATCCTCGC CGCCGTGCAA GTGCACGCTG CGGCAGAGTA TCCGCGCGAG
TGCTGCGGGT TGATCATCGC CGTGGGCCGC TCCCGGCGGT ACCTACCATG CGACAACATC
GCGACCGACC CGTCCGAGGA GTTCCGTATC TCCCCAGAGC AGTATGCGGC AGCCGAAGAC
CAGGGCAAGG TAATCGGCAT TGTGCACTCG CACCCTGACG CGACCAGCAG GCCTTCGCCG
CGCGACCTCG CGATGTGCGA GGCAACGGGG TTGCCCTGGT ACATCCTGTC GTGGCCAGAG
GGCGACCTGC GCACCATCAC TCCGACCGGT CACACCCCGC TGCTGGGCCG ACCCTTCGTG
CACGGTGCCT GGGACTGCTG GCAGGTCTGC GCGGACTGGT ATAAGCGCGA GTGGGGGTTG
GATTTTCCGG CATACGCCCG GGAGGAGGGA TGGTGGGAGC AGGCAGACGG CCCGAGCCTT
TACGAGCAGA CCTACGAGGC TGCTGGCTTT TACCAGGTCA GCCAGCCTCA GCGCGGCGAC
ATGATCGTGA TGTCTGTCGG CCGGACAGCT CACCCGAACC ACGCCGGCAT CTACCTGGGC
GCTGACGCTC GGCTGCCCGT GGAAGCGGCG GAGGTCTTCG GCCCTGGCCC GTTCATGCTG
CACCACTTGC TGGGGCGGCC ATCAGAAATT GTTGTGTTTG GCGGGCCCTG GCTCGATCGG
ACGCGGCTTG TGCTTCGCCA TCGCGATGCC AAGTGA
|
|---|
| Protein sequence | MRKHILAAVQ VHAAAEYPRE CCGLIIAVGR SRRYLPCDNI ATDPSEEFRI SPEQYAAAED
QGKVIGIVHS HPDATSRPSP RDLAMCEATG LPWYILSWPE GDLRTITPTG HTPLLGRPFV
HGAWDCWQVC ADWYKREWGL DFPAYAREEG WWEQADGPSL YEQTYEAAGF YQVSQPQRGD
MIVMSVGRTA HPNHAGIYLG ADARLPVEAA EVFGPGPFML HHLLGRPSEI VVFGGPWLDR
TRLVLRHRDA K
|
|---|
| |