Gene PputW619_3736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3736 
Symbol 
ID6112695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4154898 
End bp4155209 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content62% 
IMG OID641623522 
Productanti-sigma-28 factor, FlgM 
Protein accessionYP_001750587 
Protein GI170722899 
COG category[K] Transcription
[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2747] Negative regulator of flagellin synthesis (anti-sigma28 factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.201753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCATCG ACTTCAGTCG TTTGAATAAC TCTCCGTCCA TCACGGGCGG CGTTCGCGGC 
AATGCCGCGC CCGGCAACGC CGACAAGTCC GGCGAAACCA ACGCGCCGAA AAGCGCAAGC
GCCAGCGGAG AAGCGGTACA CCTCAGCCAA GAGGCCCAGC AGTTGCAAAA GGTCAGCGAC
AAGCTGCGCG ACCAGCCCGT TGTCGACAAT GCCCGCGTGG CACAGTTGAA ACAGGCGATC
GCAGATGGCA GCTACCAGGT CGATGCCGGC CGGGTCGCAA GCAAACTGCT CGATTTCGAA
GCCCAGCGCT GA
 
Protein sequence
MVIDFSRLNN SPSITGGVRG NAAPGNADKS GETNAPKSAS ASGEAVHLSQ EAQQLQKVSD 
KLRDQPVVDN ARVAQLKQAI ADGSYQVDAG RVASKLLDFE AQR