Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3598 |
Symbol | |
ID | 6112556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4002391 |
End bp | 4003515 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641623384 |
Product | RNA-directed DNA polymerase (reverse transcriptase) |
Protein accession | YP_001750449 |
Protein GI | 170722761 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCTC CGCTATATCC GCACAAGCCA ATCCACAGCA TTCGAGCTTT AGCGCTGGCG CTTGGTGAGA GCGAAGCGCT GTTAGAACGG CTTGCCGCTC GTGCGGACCG AATGTACCGC CATGTCCCCC AAGAGAAGAA GGTCAAGCCT GGTCAGCCAC CCGAGACGCG TGATACCTAC GACGCCCATG AGCCGCTGAA GCGAATCCAG CGAAAGCTCG TTGATCGAGT GCTGTCTAAA GCGATATTCC CGACCTATCT GCACGGGGGT ATAAGAGACT GTAAGTCCCC ACGGAGCATC CACAGTAACG CTGCTGTACA TGCGGGGGCG CGATTTGTCA TCCTTCAAGA CATTCGTAAT TTCTACCCTT CCATATCTAA GAGCCATGTT CATGCCATGT TCCGGGGGTT GTTCGGGTTC GGAGCTGGCG TTGCGGAACT GTTGTCATCT CTATGTACCC GTTCTGGAAG CACGCCTCAA GGCGCCAGTA CGAGTGGCTA CATCGCAAAT TTAGTATTCT GGGATGTGGA ACCGAAGGTG GTTAGCGATC TTTCGGGTAA AGGGTTTCAG TACTCCCGAT TCGCCGATGA CATTACTATC TCCTGTACGC GTGAGCCGGA AGCGGATGAG CTTACCGGTA TTGTCTCAGC AATCACTGGT ATGTTGGCTT CCAAGGGGTG TCATCAGAAG CGGAGCAAGC TCCATGTGCG GATACGTGGG CAGGCTCTTA AGTCGGAAGG CACTACTTTC CAGCCGATTA CGGTTACCGG TCTGAGCATT TTCAATGCTT CCCCAGGACT CACGAAGTCG GAACGGAAAC GTATACGCTC TGCCGTAAGG GAGCTTGAGC TGTCTAGCGA GACGACCTCT AATTGGGTCG AGCTTGAACC AATGTATCAC CGTGCCATGG GCCGTGTGGG ACGGCTTCTG GCCTGCGCAC ATCCAGATGG AGAGTCGCTC AAGGTAAGGC TCAACTTGAT TAAACGGTCT TATGAGAAGC CCTTACTTGA GCGCTATCAG CAGGAAATCG TCGAGCAATC TGCGCGGGAA ATTAATAATG TCTCCTGTGC TCGGACGTTA CCTTCTCAGC CAACTGAACC GGTTGACTCC CCGCCTTGGG AGTAA
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Protein sequence | MKAPLYPHKP IHSIRALALA LGESEALLER LAARADRMYR HVPQEKKVKP GQPPETRDTY DAHEPLKRIQ RKLVDRVLSK AIFPTYLHGG IRDCKSPRSI HSNAAVHAGA RFVILQDIRN FYPSISKSHV HAMFRGLFGF GAGVAELLSS LCTRSGSTPQ GASTSGYIAN LVFWDVEPKV VSDLSGKGFQ YSRFADDITI SCTREPEADE LTGIVSAITG MLASKGCHQK RSKLHVRIRG QALKSEGTTF QPITVTGLSI FNASPGLTKS ERKRIRSAVR ELELSSETTS NWVELEPMYH RAMGRVGRLL ACAHPDGESL KVRLNLIKRS YEKPLLERYQ QEIVEQSARE INNVSCARTL PSQPTEPVDS PPWE
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