Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3160 |
Symbol | |
ID | 6112110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 3499807 |
End bp | 3501063 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641622945 |
Product | outer membrane porin |
Protein accession | YP_001750019 |
Protein GI | 170722331 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCCAA CCGCTCTGCG TGCGGCGGCC GCCTGTGGCC TGCTCTGCGG CTGCCTGCCT GTTGCCGGCG CTGCTGGATT TATCGATGAC GGCAAACTCA AGCTGCAACT GCGCAACGTT TATTTCAACG AGAATTTCCG CGACGAGCAG GGCATGAGCG CACGCGCTGC CGCCACCGCC AAAAGCGAGC GAACCGAGTG GGCGCAAGGC TTTCTGCTCG ACTATCAGTC GGGCTTTACC CAAGGCACGC TGGGCCTGGG GCTCGATGCG ATGGGGCTCT TGGGGGTCAG GCTGGACTCC GGCCGCGGCC GCAGTGGTAC GGGCCTGCTG CCGGTGCATG ACGACGGTCG CGCCGCCCAG GAGTTCGCCA GTGCCGGGGT GACGGCAAAG GCCCGCCTGG GTAGTACGGT GGTCAAGCAC GGTACCTTGC TGCCCAAGAC ACCCGTACTG GTCTACAACG ATGCCCGATT ACTGCCGCAG ACCTACCAGG GCACGCAGCT GACGAGTACC GACATCGATG GGCTGACGCT CACTGCCGGG CATCTGGACC GGTTCAAGCA ACGCGACTCG TCCAACAGTA CCGGCTTGTA CCTGGACGGT TATGGCGGCG CCGAGTCTGG CGACTTCAGC TTCGCCGGCG CCGACTACGC GTTCAGTAAG CACTTGCGCT TGAGCTACTT CCACGGTCAG CTCGAGCACT TCTACCGCCA GGACTTTGCC GGCCTGGTAC ATGACCTTGC GCTGGCCGGC GGGGTGCTGA CCACCGACCT GCGGTATTTC ACCAGCCGTG ACAGCGGCGC CGCGTACGGT GGCAGCATCG ACAACGACAT GTTCAGCGCA CAGGTGTCTT ACGCGCATTC AGGGCACACC TTCGGCGCCG GGTATCAGGT ATTGGACGGT GAAGCCGGCC TGCCGTACAT CAGTGGTGCA ACGGTGTATT CGTTCAGCAA CGTTGGCATC GGCAAGTTCA TCGAGGAAGA AGAAAAGACC TGGATGGCAA GCTATGCCTA CAACTTTGCC GCCGCAGGCG TGCCTGGGCT GACCTTCATG ACACGCTACC TGAGCGGGGA CAACGGCCGC TCCGGGGCGC AGGGGCTGAG TGAATGGGAG CGTGACGCCG AGCTTGCGTA TGTGGTGCAG GGCGGGGCAC TCAAAGGGCT TGGGGTACGG CTGCGCAACT ATGTCTACAG GTCTGACTTT TCCCGCGGTC GGGACAGCAA CCGCCTTTAC CTGACTTATG ACATTGCCAT CTGGTGA
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Protein sequence | MSPTALRAAA ACGLLCGCLP VAGAAGFIDD GKLKLQLRNV YFNENFRDEQ GMSARAAATA KSERTEWAQG FLLDYQSGFT QGTLGLGLDA MGLLGVRLDS GRGRSGTGLL PVHDDGRAAQ EFASAGVTAK ARLGSTVVKH GTLLPKTPVL VYNDARLLPQ TYQGTQLTST DIDGLTLTAG HLDRFKQRDS SNSTGLYLDG YGGAESGDFS FAGADYAFSK HLRLSYFHGQ LEHFYRQDFA GLVHDLALAG GVLTTDLRYF TSRDSGAAYG GSIDNDMFSA QVSYAHSGHT FGAGYQVLDG EAGLPYISGA TVYSFSNVGI GKFIEEEEKT WMASYAYNFA AAGVPGLTFM TRYLSGDNGR SGAQGLSEWE RDAELAYVVQ GGALKGLGVR LRNYVYRSDF SRGRDSNRLY LTYDIAIW
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