Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3053 |
Symbol | |
ID | 6112003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 3390472 |
End bp | 3391395 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641622838 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001749912 |
Protein GI | 170722224 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGAAG ACAACCTTGT CATTCAAATG TTGAATACCA GGATGTCTAT CAGCGTTAAA TCGAATAGGG CTCTGTTCGA CCTCGACCTG CTGCGTGCCA TCGTCGTCGT GGCCGATTGC GGCAGCTTCA CCACCGCTGC CGCACGCCTG CATTCGACGC AATCGACCAT CAGTCAGAAA GTCCGCCGGC TCGAGGATAT GGTCGGCCAT CGCCTGCTGG TGCGCGGGAA CCGTGACGTG TTGCCGACCG ACGCCGGCCA GACCTTGCTC GGCTACGCCC GGCACATGCT GGCATTGAAC GACCAGATGC TCGAGGCTTT GGCCGGTGCC ATGGTCGGCG TCACCGTACG TTTGGGCGTT CCCGAAGATT TCGTCGGCGG GCGCACCACC AACGCGCTGT CGGCATTCAG CCGGCTGCAC CCGCAGGTCA AGCTGGAGGT CACCAGCGGC CTGTGCCGCG ACCTCAGCCA GGCCTATGAC AATGGCGAAC TTGACCTGGT GTTGCTCAAG CAGCGACGCA ACAGCCGCGA AGGCGTGGCG TGCTGGCCCG AGCGTCTGCA GTGGATCGAC AGCGCACGCA TGCCGTCCTT CGAGCTCGAC CCGATCCCGC TGGTGACCTT TCCGCCACGC GGCTTGTACC GCGATGACAT GATCACCGCC ATCGAAGGCA TGGGCCGGCG CTGGCGCATC AGTTTCACCA GCTCCAGCCT CAGTGGCATC CAGGCCGCGG TGGCCGACGG CATGGGCATC AGCCTGTTGC CACCACGGGC GGCGACCCCT GAGCATCGGG TGCTTGGCAG GCAACACGGG TTGCCTGAGG TGGACAGCTA CGAAATCGTC ATCGTCCACC GGCCGACGGC GGATGTGATG GTCACGGCAT TGGCCAAGGT AATGTCGCAG GTGCTGGAGG GTGGAGGGAT CTGA
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Protein sequence | MVEDNLVIQM LNTRMSISVK SNRALFDLDL LRAIVVVADC GSFTTAAARL HSTQSTISQK VRRLEDMVGH RLLVRGNRDV LPTDAGQTLL GYARHMLALN DQMLEALAGA MVGVTVRLGV PEDFVGGRTT NALSAFSRLH PQVKLEVTSG LCRDLSQAYD NGELDLVLLK QRRNSREGVA CWPERLQWID SARMPSFELD PIPLVTFPPR GLYRDDMITA IEGMGRRWRI SFTSSSLSGI QAAVADGMGI SLLPPRAATP EHRVLGRQHG LPEVDSYEIV IVHRPTADVM VTALAKVMSQ VLEGGGI
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