Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2612 |
Symbol | |
ID | 6111563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 2895323 |
End bp | 2896624 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641622401 |
Product | major facilitator transporter |
Protein accession | YP_001749475 |
Protein GI | 170721787 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.209857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.81136 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAAG ACAACCATTT TCTTAAGAAA AAACGCGTCT GGATCTACGC GTTTCTCTTC ACCCTGACAT TGATCAACTA TGTCGACCGC GTCTCGCTCT CGGTGGCGTC CAAAGTTCTT AAGGAAGAAT TCGATATCTC GCCGGTCGCG ATGGGCTATC TGTTCTCGTC CTTCGTCTGG CTGTACTTTC TTGCGCTCAT TCCCATGGGC TATCTCGTAG GCAGGTTCGG CCCGAAAAAG GTCAATGGCT ACGGGATCGG CGTCTGGTCA GTGGCCACAG CCTGCACGGC ATTGTCGACG GGTTTCATCT CGTTACTCAG TTGCCGGCTC ATCATGGGTA TGGGCGAAGC GACTACCTAC CCCGCTGGCG CCCGGGTCAT TCGTGAATGG ATGCCCCTCA AAGAACGTGG TTTGGCCACC GCTGTATTCC ATAGCGGCAG CCTGGTCGGC CCTGCCATCG GTGCCATCGG TTTTGGCTGG TTGATCAGTG CCTTCGGATG GCGCATCGCC TTCGTCGTTG CCGGTGCTTT GGGCTTCATC TGGTTGGCGG CTTGGTTGAA ATGGTACAGC CACCCGTCAA AGGCGCCTTG GTTGGACGAT GTCGAGCGCG CTGAAATCGC CGAGGGTGGC ACGTCATCCG CTGATGGCCC GGAAAAATCG GTATCGCTGG GCCTCAAGGG CTTAGCCCGT TCGAGCAGCA TGTGGGCAAT CGCGCTATCC CACGGCTGTG CCGTCTACGC GACCTACTTC TTTCTCACCT GGCTGCCGAG CTACCTGCAG GCCGAGAAAG GCCTGACGGT TATGTCGAGT GGCCTTTATA CCGCCATCCC ATACCTGGGC GCGGCCATCC TTGCCATTGT GATTGGCCGC CTGAGTGACA AGGCCATGCG CCCCGGCGCT GCCGAGACGG GCCAACGTCG CCTGGTAGTG GCCAGCGTGC TGCTCGCATC CTCTGTGATC TTCCTGGTAC CAGCGATCGA CAGCACATGG GCAATTCTTT TTGTGATCAC GCTGTCATTG GCGACGTGCG CATCGGCGAT CTCGTTGAAC CTCTCACTGG TTAATGACCT GGTGCGCTCG GAAGACGATG TTGGCACCGC CGCAGGCTTT ATCACTGCCG TCGGCAACCT CTTTGGCCTG CTGGCTCCGA TCGTGACCGG CTACGTGGTG GCGGGTTCGG GGAGCTTTGC CCTGGCTTTC GTAGTGGTAG GCGCGCTGTT GGTTGTTGGC GCCGTCCTGT CGATGTTCTG TACCCGTCGC CCGATCGGGA TAGCCACGCC TGGTCGACAG GCCATGGCTT GA
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Protein sequence | MQKDNHFLKK KRVWIYAFLF TLTLINYVDR VSLSVASKVL KEEFDISPVA MGYLFSSFVW LYFLALIPMG YLVGRFGPKK VNGYGIGVWS VATACTALST GFISLLSCRL IMGMGEATTY PAGARVIREW MPLKERGLAT AVFHSGSLVG PAIGAIGFGW LISAFGWRIA FVVAGALGFI WLAAWLKWYS HPSKAPWLDD VERAEIAEGG TSSADGPEKS VSLGLKGLAR SSSMWAIALS HGCAVYATYF FLTWLPSYLQ AEKGLTVMSS GLYTAIPYLG AAILAIVIGR LSDKAMRPGA AETGQRRLVV ASVLLASSVI FLVPAIDSTW AILFVITLSL ATCASAISLN LSLVNDLVRS EDDVGTAAGF ITAVGNLFGL LAPIVTGYVV AGSGSFALAF VVVGALLVVG AVLSMFCTRR PIGIATPGRQ AMA
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