| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2585 |
|---|
| Symbol | |
|---|
| ID | 6111536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 2869503 |
|---|
| End bp | 2870120 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641622374 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001749448 |
|---|
| Protein GI | 170721760 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0125] Thymidylate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.633344 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGTT CGCTTTTCGT TTCCATGGAC GGGCCCAAGG GCACCGGCAA AACCACACTG
TTGGAGGCTG TTACCCAGGC ACTGCGTGCT GACGGCCTGA AAGTCATCCG TATTTGTGAG
CGCAAGAGCG ATCCCTTCAG GGCGCAAACC ATGGCCCTGG TCAACCAGTT CGTCAGAAGC
CCCAGCCCGG ACCTTGAGCT GGCGGTTTGT GAGCGCTTTG CCCAGAGCCG TGCCTGGATA
TCCCAGCAGG TGCTGCCCAG ACAACCGCCG GGCAGCATCA TCCTGATCGA CCGCTGGTAC
CCGTCGGAAG CCGCGTTTCG CCGGCTGATC CCGTTCCCTG AGATCTTGCG CCTGAACATC
GCCAGTAATG TGCGTGTACC CGACCTGAGT GTGGGGGTCG TCACCGCCCC GGATATTTCA
TGGGCGAGGG CGACGGCACG CACGCGCGGG TTGAGCAGCA CGGTGATGCA CAGGTTCGAA
GAGCATGTGG CCTGTACCCA GGCCTTCGAG CGAGCCGTCG CAGAGAACGG CTGGCTGTTG
TGCCGCAATG AAGGGACGAT CGAAGACGCT ACGCTGCAGG TGGTTTCAGC GATTCAAGGC
GTGCTTCGAT GCCCTTAG
|
|---|
| Protein sequence | MSRSLFVSMD GPKGTGKTTL LEAVTQALRA DGLKVIRICE RKSDPFRAQT MALVNQFVRS
PSPDLELAVC ERFAQSRAWI SQQVLPRQPP GSIILIDRWY PSEAAFRRLI PFPEILRLNI
ASNVRVPDLS VGVVTAPDIS WARATARTRG LSSTVMHRFE EHVACTQAFE RAVAENGWLL
CRNEGTIEDA TLQVVSAIQG VLRCP
|
|---|
| |