Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2442 |
Symbol | |
ID | 6111395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 2711513 |
End bp | 2712196 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641622237 |
Product | ThiJ/PfpI domain-containing protein |
Protein accession | YP_001749311 |
Protein GI | 170721623 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.197595 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGA AAATTCTGGT GGTACTGACC AATACCGCCA AATATCCGAC CCTGAATCGC GCAACCGGTT TATGGCTGGG TGAAGCTGTG CATTTTGTAG AGACGGTTCA GCAAGCTGGT TATACAGTAG ACTACGTCAG CCCCGGAGGC GGCTACGTGC CAATCGATCC GCACAGCTTG CAGATGGCGC CCGAGATGGA TTGGAACTAC TACAACGACA AGGGTTTCAT GAACCGCCTG GGCGCCTCGC TAAGCCCCGG CCAGGTCACG GCAGACGAAT ACTGTGCCAT CTATTACACC GGTGGCCATG GCGTGATGTG GGACTTCCCT GACAACCCGC AATTGCAGGA GCTGGCGCGC AGGATATACG AGAAGAACGG CGTGGTGGCG GCTGTCTGCC ACGGCGTCGC AGGGCTGCTT AACATCAAAC TCAGTGATAA CAAGCTGCTG CTCAAGGATC GCCAGGTCAC CGGTTTTTCA AATACCGAAG AAAAGCTTGC CGAACTTGAG GAGGTGGTGC CTTTTCTCAC CGAGAACGAA CTGGGCGCGC GAGGGGGCAG TTACAGCAAG CATGATGATC CCTGGAAGCC CTTTGTTGTC TGTGATGGCC GCCTGATCAC AGGACAAAAC CCCGCCTCTA CGCGTTTACT GGCAGAAAAA GTAGTTCAGA CGCTCAACCC GTAA
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Protein sequence | MSKKILVVLT NTAKYPTLNR ATGLWLGEAV HFVETVQQAG YTVDYVSPGG GYVPIDPHSL QMAPEMDWNY YNDKGFMNRL GASLSPGQVT ADEYCAIYYT GGHGVMWDFP DNPQLQELAR RIYEKNGVVA AVCHGVAGLL NIKLSDNKLL LKDRQVTGFS NTEEKLAELE EVVPFLTENE LGARGGSYSK HDDPWKPFVV CDGRLITGQN PASTRLLAEK VVQTLNP
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