Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_2247 |
Symbol | |
ID | 6111200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 2499566 |
End bp | 2500270 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641622042 |
Product | NUDIX hydrolase |
Protein accession | YP_001749116 |
Protein GI | 170721428 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.267039 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTACAG CCGAAGTCCT GGCCAGCGTC GATATCGTCG CCCTGCGCCT GGCCCCCGAA GCCCAGCATC TGCAAGTGTT GTTGCATCGC CGCGAGCGCG AGCCCCATGC TGCTCAGTGG GCTTTGCCCG GTGTGCTCGT CAATGGCCGC ACCCCGGACA CCAGCCTGGA GGCTGCTGCC GAGCGCGCGC TGGGCGAGAA GGCCCGGGTG CTGCCGCGTT ACCTGGAGCA GGTAGGTACC GAAGGCAATG CCTTCCGCGA CCCGCGCGGC TGGTCGTTGA GCACCTATTA CCTGGCCTTG CTTGACCCTC GGCAGCAGGT TGAGGGTGAC CAGTTGGCCT TTTTTGACCT GGCCAGTGTG TTGGGCCGCA AGGTCCTGCT TCCGTTCGAT CACAACCTGC TGGTGGAGCG CGCTCGCGAG CGGCTGGCGA GCAAGACGGT GTACAGCAGC CTGCCGCTGA ACCTGCTGGC CGAGAAGTTC ACGGTGCTCG ATGCATTGGG GGCGGTGCAG GCGTGCCTGG GCCAGGCCGT GAACAACACC TCGCTGCGCA AGCGCCTGGA GCGCCTGCGT GAGCTGGGTT GGGTGCGTGA TACGGGGGAG AAGAATCAGC CGCGGCTCGG CAGGCCGCAG CAGTTGTATC AATATACGCC GCTGGGAGAT CGGCCGTTCA TGTTCGACCG TAGCTTACTG CCGGAAGGTG CTTGA
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Protein sequence | MSTAEVLASV DIVALRLAPE AQHLQVLLHR REREPHAAQW ALPGVLVNGR TPDTSLEAAA ERALGEKARV LPRYLEQVGT EGNAFRDPRG WSLSTYYLAL LDPRQQVEGD QLAFFDLASV LGRKVLLPFD HNLLVERARE RLASKTVYSS LPLNLLAEKF TVLDALGAVQ ACLGQAVNNT SLRKRLERLR ELGWVRDTGE KNQPRLGRPQ QLYQYTPLGD RPFMFDRSLL PEGA
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