| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2126 |
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| Symbol | |
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| ID | 6111079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 2362270 |
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| End bp | 2363367 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641621921 |
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| Product | carboxynorspermidine decarboxylase |
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| Protein accession | YP_001748995 |
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| Protein GI | 170721307 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01047] carboxynorspermidine decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.934479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.236457 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGA CGCCGTATTA CCTCATCGAT AAAACCAAGC TGTTGAGCAA CATGGAGAAG
ATCGCCTACG TGCGCGAACA CTCCGGTGCC AAGGCACTGC TTGCCCTCAA GTGCTTCGCC
ACCTGGTCGG TCTTCGACCT GATGCAGCAG TACATGGACG GCACCACGTC CTCGTCGCTG
TACGAGCTCA AGCTCGGCCG CCAGAAGTTC GCCGGCGAGA CCCACGCCTA CAGCGTGGCC
TGGGCCGACG ACGAGGTCGA GGAAATGCTC GAGAACTGCG ACAAGATCAT CTTCAACTCG
ATCGGCCAGC TGCAGCGCTT CGCCGAGAAG TCCGAAGGCA AGGTCCGCGG CCTGCGCGTC
AACCCGCAGG TGAGCAGCTC CGACTACCTG CTGGCCGACC CGGCCCGCCC GTTCAGCCGC
CTCGGTGAAT GGGACCCGGA GAAGATCGAG AAGGTCATTT CGCAGATTTC CGGCTTCATG
TTCCACAACA ACTGCGAGAA CGGTGACTTC GGCCTGTTCG ACAAGATGCT GACGCACATC
GAAGAGCGCT TCGGCCACCT GCTGCACAAG GTCGAGTGGG TCAGCCTGGG TGGCGGCATT
CACTTCACCG GTGAAGACTA TGCAGTCGAT GCGTTCTGCG CGCGCCTGAA AGCCTTCTCG
CAGACGTATG GCGTGCAGGT CTACCTGGAG CCGGGCGAAG CGGCCATCAC CAACAGCGCC
TCGCTGGAAG TCACCGTGCT CGACACCCTG TACAACGGCA AGAACCTGGC CGTGGTCGAC
AGCTCGATCG AAGCACACCT GCTCGACCTG CTGATCTACC GGCTGAACGC CAAGATGGCC
CCCAACGATG GCGAGCACAC CTACATGGTC TGCGGCAAAT CGTGCCTGGC CGGCGACATC
TTCGGCGAGT ACCAATTCGA TCGTCCGCTG GCCATCGGCG ATCGCCTGTC GTTCATCGAC
ACGGCGGGTT ACACCATGGT CAAGAAAAAC TGGTTCAACG GTTTGAAGAT GCCATCCATC
GCGGTCAAGC AGCTCGACGG CAGCGTCGAA GTGGTGCGCG AGTTCGGTTT CGAAGACTAC
GTTTCCAGCC TGTCGTAA
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| Protein sequence | MIKTPYYLID KTKLLSNMEK IAYVREHSGA KALLALKCFA TWSVFDLMQQ YMDGTTSSSL
YELKLGRQKF AGETHAYSVA WADDEVEEML ENCDKIIFNS IGQLQRFAEK SEGKVRGLRV
NPQVSSSDYL LADPARPFSR LGEWDPEKIE KVISQISGFM FHNNCENGDF GLFDKMLTHI
EERFGHLLHK VEWVSLGGGI HFTGEDYAVD AFCARLKAFS QTYGVQVYLE PGEAAITNSA
SLEVTVLDTL YNGKNLAVVD SSIEAHLLDL LIYRLNAKMA PNDGEHTYMV CGKSCLAGDI
FGEYQFDRPL AIGDRLSFID TAGYTMVKKN WFNGLKMPSI AVKQLDGSVE VVREFGFEDY
VSSLS
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