| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2111 |
|---|
| Symbol | |
|---|
| ID | 6111064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 2344086 |
|---|
| End bp | 2345060 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641621906 |
|---|
| Product | delta-aminolevulinic acid dehydratase |
|---|
| Protein accession | YP_001748980 |
|---|
| Protein GI | 170721292 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0113] Delta-aminolevulinic acid dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAATC ATTTCCCTTC CGTTCGCCCC CGCCGCCTGC GCCAGAACGA GTCGCTGCGC
ACGATCTTCC AGGAGACGGA ATTCCGCCTC GAAGACCTGA TCCTGCCAAT CTTCGTCGAG
GAAGGCATCG ACGACTTCGT GCCGATCAGC AGCATGCCGG GGGTCAACCG TATCCCTGAG
AAACTGCTGG CCCAGGAAAT CGAACGCTAC GCTCGCGCCG GCATCAAGTC GGTGATGACC
TTCGGCGTTT CGCACAACCT CGATGCCACC GGTAGCGATA CCTGGAACGA AAACGGCCTG
GTGGCGCGCA TGGCTCGCAT CTGCAAGGAC AGCGTGCCGG AAATGGTGGT GATGTCCGAC
ACCTGTTTCT GTGAGTACAC CAGCCACGGC CATTGCGGCG TACTGCACGA CCATGGTGTG
GACAACGACG CCACCCTGGC CAACCTGGGC AGGCAGGCGG TGGTTGCTGC GGCAGCCGGT
GCCGACTTCA TCGCGCCGTC GGCGGCGATG GACGGTCAGG TTCAGGCAAT CCGTGGTGCA
CTGGATGCCG CGGGCTTTCA CGACACCGCG ATCATGGCCT ACTCCACCAA GTTCGCCTCG
TCGCTCTATG GCCCGTTCCG TGAAGCCGGT GGCACCACGC TCAAGGGTGA CCGCAAGAGC
TACCAGATGA ACCCGATGAA CCGCCGCGAA GCGGTGCGCG AGTCGCTGCT CGACGAGCAG
GAAGGCGCCG ATGTGCTGAT GGTCAAACCG GCGGGTGCCT ACCTGGACGT GATCGCCGAC
ATTCGCGCCG CGTCACGTTT GCCGCTGGCG GCTTACCAGG TCAGCGGTGA GTACGCGATG
ATCAAGTTCG GCGGCCTGGC CGGCGCCATC GACGAGGGGC GAGTGGTGCG TGAGAGCATT
GGCGCGATCA AGCGTGCCGG CGCCGATCTG ATCCTGACCT ACTTCGCCAT GGACCTGGCC
CGCGAAGGCA TCTGA
|
|---|
| Protein sequence | MSNHFPSVRP RRLRQNESLR TIFQETEFRL EDLILPIFVE EGIDDFVPIS SMPGVNRIPE
KLLAQEIERY ARAGIKSVMT FGVSHNLDAT GSDTWNENGL VARMARICKD SVPEMVVMSD
TCFCEYTSHG HCGVLHDHGV DNDATLANLG RQAVVAAAAG ADFIAPSAAM DGQVQAIRGA
LDAAGFHDTA IMAYSTKFAS SLYGPFREAG GTTLKGDRKS YQMNPMNRRE AVRESLLDEQ
EGADVLMVKP AGAYLDVIAD IRAASRLPLA AYQVSGEYAM IKFGGLAGAI DEGRVVRESI
GAIKRAGADL ILTYFAMDLA REGI
|
|---|
| |