Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1996 |
Symbol | |
ID | 6110949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 2226883 |
End bp | 2228190 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641621791 |
Product | major facilitator transporter |
Protein accession | YP_001748865 |
Protein GI | 170721177 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.100465 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCAGG AGCAGCGGCT CGTCCGCCTG ATCACACTGA AACTCATCCC TTTTCTGGTT CTGCTTTACC TGGTGGCCTA TGTCGATCGT TCGGCGGTGG GCTTTGCCAA GCTGCACATG GGCGCCGACA TCGGCCTGGG TGACGCGGCA TATGGCCTTG GCGCCGGGCT GTTCTTCATC GGTTATTTTC TTTTCGAAGT GCCGAGCAAC CTGTTGCTCG ACCGCTTCGG TGCACGTCGC TGGTTCGCCC GCATTTTGCT GACCTGGGGC GCGATCACTG TCGGCATGGC GTTTGTCACC GGGCCCAACG GCTTTTATGT GATGCGTTTT TTGTTGGGGG CCGCTGAGGC GGGCTTCTTC CCGGGGGTGC TGTACTACAT CACCCAGTGG TACCCGGTGC GCCATCGCGG CAAGATTCTG GGCTTCTTCA TTCTCTCGCA GCCGCTGGCC ATGCTGATCA CCGGGCCGCT TTCGGGTGCG CTGCTGGGGC TTGAGGGCAT CTACGGTCTG CATGGCTGGC AGTGGTTGTT CATCTGTATC GGTATCCCGG CAGTGCTGTT GGCCTGGCCC ACCTTGCGCC TGCTGCCGGA CGGCCCTGCC AAGGTGCGCT GGCTCAGCGA CGAGCAACGC AACTGGCTGC AGGAGCAGTT GGCCAACGAC CTGTGCGAAT TCGGCCAGAC CCGCCATGGC AACCCGCTGC ATGCCCTTAA AGATGGCCGG GTGCTGTTGC TGGCGCTGTT CTACTTGCCG ATGACCCTGA GCATCTATGG CCTGGGCCTG TGGCTGCCAA CGCTGATCCA CCAGTTTGGC GGCAGTGACC TGGTCACCGG TTTTGTCTCG GCGGTGCCTT ACCTGTTCGG CATCATCGGC CTGCTGATCG TGCCGCGAAG CTCCGACCGC CTGAACGACC GCTATGGCCA TCTGGGCCTG CTGTACGCCC TGGGTGCCGT CGGCCTGTTC TTCAGCGCCT GGCTGACGGT GCCGGTGCTG CAGTTGGCCG CGCTGTGCCT GGTGGCGTTC GCGCTGTTCT CCTGCACGGC CATCTTCTGG ACGCTGCCGG GGCGGTTCTT CTCTGGTGCC AGCGCTGCTG CGGGTATCGC CTTGATCAAC TCGATCGGCA ACCTCGGCGG TTACCTGGGC CCGTTCGGCA TCGGCGCGCT GAAGGAGTAC ACCGGGCAGT TGTCGTCGGG CCTGTATTTC CTGGCGCTGG TGATGCTGTG CGGGGTGCTG CTCACGGGCG TGGTCTACAA CCGCCTGGAG CGCCGCCAGC GCCTGGCTTC CACGCGGGCG GCCGACGCCT CCCGCTAA
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Protein sequence | MIQEQRLVRL ITLKLIPFLV LLYLVAYVDR SAVGFAKLHM GADIGLGDAA YGLGAGLFFI GYFLFEVPSN LLLDRFGARR WFARILLTWG AITVGMAFVT GPNGFYVMRF LLGAAEAGFF PGVLYYITQW YPVRHRGKIL GFFILSQPLA MLITGPLSGA LLGLEGIYGL HGWQWLFICI GIPAVLLAWP TLRLLPDGPA KVRWLSDEQR NWLQEQLAND LCEFGQTRHG NPLHALKDGR VLLLALFYLP MTLSIYGLGL WLPTLIHQFG GSDLVTGFVS AVPYLFGIIG LLIVPRSSDR LNDRYGHLGL LYALGAVGLF FSAWLTVPVL QLAALCLVAF ALFSCTAIFW TLPGRFFSGA SAAAGIALIN SIGNLGGYLG PFGIGALKEY TGQLSSGLYF LALVMLCGVL LTGVVYNRLE RRQRLASTRA ADASR
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