Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_1994 |
Symbol | |
ID | 6110947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 2223972 |
End bp | 2224694 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641621789 |
Product | GntR domain-containing protein |
Protein accession | YP_001748863 |
Protein GI | 170721175 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.122046 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.944631 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTACC GCCAGCCCAC CACGCGCAAA AGCATGCATG CCACCCTGGT CCAGGACCTC GGCCTGCAAA TCGTATCCGG CCAACTCGCA CCCGGGCAAA AGCTGCCCTC CGAGGCCAGC CTGTGCGAAA GCTACGCGAT CAGCCGGCCG GTGTTCCGCG AAGCGATGCG CGCCCTGACC GCCAAGGGCC TGGTCGAAGC CCGCCCACGG GTCGGTACGC TGGTGAGGCC CCGCCATGAC TGGCACATGC TCGACCCCGA CGTGCTGCAC TGGCTGATGC AGGCCACCCC GCAAAAGGAC TTCTTCAACA CCCTGTCCAG CGTGCGCTGG GTTATCGAAC CCGCCGCCGC CGCGCTGGCC GCCACCAACG CCAGCCCCGA GGATGTCGAG TCGATCGCCG AGGCCTACCA GCGCATGGAA GCCGCGCGCA CCCATGAAGA GCGCCTGCAA CCCGACCTGG ACTTCCACGC CCGCATCGCC GACGCCACCC ACAACGATCT GCTGGCCTAC CTGTGCAACA TGCTCTCGAT GGCGCTGCGC GAATCGGTGC GCTATTCCAA CCAGCGGCCG AACTTCAACC AACTCGCCCT GCCCCGGCAC AAGGCGATTC TCACGGCTAT CCAGAACGGC GACGCGCTGG GTGCACGGCA TGCTTCGCTG GTGCAGCTTG AAGATGCGCG TGTGGCGTTG AGCAAGGTCT TGGGGCAAGA TCCGACTAGC TGA
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Protein sequence | MNYRQPTTRK SMHATLVQDL GLQIVSGQLA PGQKLPSEAS LCESYAISRP VFREAMRALT AKGLVEARPR VGTLVRPRHD WHMLDPDVLH WLMQATPQKD FFNTLSSVRW VIEPAAAALA ATNASPEDVE SIAEAYQRME AARTHEERLQ PDLDFHARIA DATHNDLLAY LCNMLSMALR ESVRYSNQRP NFNQLALPRH KAILTAIQNG DALGARHASL VQLEDARVAL SKVLGQDPTS
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